Escherichia coli UC4224 |
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Putative Escherichia coli UC4224 RM systems
Ref: Belloso Daza,M.V. et al. unpublished
REBASE ref # 35295
| Sequence length: | GenBank #: | |
| Chromosome: | 5,047,333 bp | CP104472 |
| plasmid pUC4224_1: | 111,840 bp | CP104473 |
REBASE acronym: EcoUC4224
Org_num: 61965
All begin N4S17_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | 95 aa hypothetical protein | |||
| 1795 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoUC4224ORF1795P | |
| 1800 | DUF977 family protein | |||
| 4100 | drug/metabolite exporter YedA | |||
| 4105 | V | V.SflFF64DcmP (99% identity) | V.EcoUC4224DcmP | |
| 4110 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoUC4224DcmP |
| 4115 | phosphohydrolase | |||
| 11180 | DNA-binding transcriptional regulator Fis | |||
| 11185 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.EcoUC4224ORF11185P |
| 11190 | DUF2556 family protein | |||
| 11735 | ribulose-phosphate 3-epimerase | |||
| 11740 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoUC4224DamP |
| 11745 | cell division protein DamX | |||
| 16765 | AAA family ATPase | |||
| 16770 | R | EcosC41ORF5230P (100% identity) | EcoUC4224ORF16770P | |
| 16775 | HNH endonuclease | |||
| 20005 | PerC family transcriptional regulator | |||
| 20010 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoUC4224ORF20010P |
| 20015 | LexA family transcriptional regulator | |||
| 21730 | TraR/DksA family transcriptional regulator | |||
| 21735 | M | M.EcoUTI89ORFBP (100% identity) | GATC | M.EcoUC4224ORF21735P |
| 21740 | replication endonuclease | |||
| 23430 | TrmB family transcriptional regulator | |||
| 23435 | M | M.EcoAVFP2ORFAP (99% identity) | M.EcoUC4224ORF23435P | |
| 23455 | Shiga toxin Stx2a subunit A | |||
| 24490 | TrmB family transcriptional regulator | |||
| 24495 | M | M.Ecos154ORF3040P (100% identity) | M.EcoUC4224ORF24495P | |
| 24510 | cell envelope integrity protein TolA | |||
| plasmid pUC4224_1 | ||||
| 25135 | 73 aa hypothetical protein | |||
| 25140 | M | M.EcoW24ORF24620P (100% identity) | SAY | M.EcoUC4224ORF25140P |
| 25145 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16755 | 128 aa hypothetical protein | |||
| 16760 | R | Ecows53McrCP (100% identity) | EcoUC4224McrCP | |
| 16765 | R | SflN101McrBP (100% identity) | EcoUC4224McrBP | |
| 16770 | HNH endonuclease | |||