Escherichia coli E2 |
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Putative Escherichia coli E2 RM systems
Ref: Feng,A. et al. unpublished
REBASE ref # 35294
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,011 bp | CP104509 |
| plasmid p1: | 124,280 bp | CP104510 |
| plasmid p2: | 103,229 bp | CP104511 |
| plasmid p3: | 83,246 bp | CP104512 |
REBASE acronym: EcoE2a
Org_num: 61957
All begin N5O74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2970 | endoribonuclease SymE | |||
| 2975 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoE2aORF2980P |
| 2980 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoE2aORF2980P |
| 2985 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoE2aORF2980P |
| 2990 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.EcoSCU109ORF25P (100% identity) | M.EcoE2aORF25P | |
| 30 | phage portal protein | |||
| 945 | 28 aa hypothetical protein | |||
| 950 | M | M.EcoCEC0010ORF24355P (100% identity) | GATC | M.EcoE2aORF950P |
| 955 | RusA family crossover junction | |||
| 4140 | NinE family protein | |||
| 4145 | M | M.EcoPEC0001ORF4630P (100% identity) | GATC | M.EcoE2aORF4145P |
| 4150 | recombination protein NinB | |||
| 7780 | TraR/DksA family transcriptional regulator | |||
| 7785 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.EcoE2aORF7785P |
| 7790 | replication endonuclease | |||
| 9035 | recombination protein NinB | |||
| 9040 | M | M.EcoPEC0001ORF24880P (100% identity) | GATC | M.EcoE2aORF9040P |
| 9045 | NinE family protein | |||
| 14550 | drug/metabolite exporter YedA | |||
| 14555 | V | V.EcosPA11DcmP (100% identity) | V.EcoE2aDcmP | |
| 14560 | M | M.EcoCEC0010DcmP (100% identity) | CCWGG | M.EcoE2aDcmP |
| 14565 | phosphohydrolase | |||
| 17250 | NinE family protein | |||
| 17255 | M | M.Sfl9783ORF5079P (98% identity) | M.EcoE2aORF17255P | |
| 17260 | recombination protein NinB | |||
| 22455 | DNA-binding transcriptional regulator Fis | |||
| 22460 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoE2aORF22460P |
| 22465 | DUF2556 family protein | |||
| 23080 | ribulose-phosphate 3-epimerase | |||
| 23085 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE2aDamP |
| 23090 | cell division protein DamX | |||
| plasmid p1 | ||||
| 26060 | recombination-associated protein RdgC | |||
| 26065 | M | M.Efe41C23ORF22470P (99% identity) | M.EcoE2aORF26065P | |
| 26075 | 137 aa hypothetical protein | |||
| plasmid p2 | ||||
| 26755 | 103 aa hypothetical protein | |||
| 26760 | M | M.EcoCEC0011ORF28270P (100% identity) | SAY | M.EcoE2aORF26760P |
| 26765 | 73 aa hypothetical protein | |||
| plasmid p3 | ||||
| 27200 | 101 aa hypothetical protein | |||
| 27205 | M | M.SflFF3ORF25360P (100% identity) | SAY | M.EcoE2aORF27205P |
| 27210 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2985 | type I restriction-modification system | |||
| 2990 | R | Ssp28760MrrP (100% identity) | EcoE2aMrrP | |
| 2995 | GTPase | |||
| 10495 | tail fiber assembly protein | |||
| 10500 | R | Ecos15955McrBP (100% identity) | EcoE2aMcrBP | |
| 10505 | R | Ecos15955McrCP (95% identity) | EcoE2aMcrCP | |
| 10510 | isocitrate/isopropylmalate family dehydrogenase | |||