Riemerella anatipestifer SCVM0004 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Riemerella anatipestifer SCVM0004 RM systems
Ref: Li,P. et al. unpublished
REBASE ref # 35180
Complete sequence: 2,133,658 bp
GenBank #: CP104076
REBASE acronym: Ran4
Org_num: 61922
All begin N1F80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9220 | IS982-like element ISRa1 family transposase | |||
| 9225 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.Ran4ORF9225P |
| 9230 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.Ran4ORF9225P |
| 9235 | R | RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | Ran4ORF9225P |
| 9240 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | universal stress protein | |||
| 3015 | M | M.RanYMDndCP (100% identity) | GAAC | M.Ran4DndCP |
| 3020 | DNA sulfur modification protein DndD | |||
| 3015 | DNA phosphorothioation system sulfurtransferase | |||
| 3020 | M | M.RanYMDndDP (100% identity) | GAAC | M.Ran4DndDP |
| 3025 | DndE family protein | |||
| 3020 | DNA sulfur modification protein DndD | |||
| 3025 | M | M.RanYMDndEP (100% identity) | GAAC | M.Ran4DndEP |
| 3030 | HmuY family protein | |||
| 6690 | 128 aa hypothetical protein | |||
| 6695 | RM | RanYb2ORF5990P (92% identity) | Ran4ORF6695P | |
| 6700 | 213 aa hypothetical protein | |||
| 7850 | 162 aa hypothetical protein | |||
| 7855 | R | RanYb2ORF4780P (100% identity) | GAATTC | Ran4ORF7860P |
| 7860 | M | M.RanYb2ORF4780P (100% identity) | GAATTC | M.Ran4ORF7860P |
| 7865 | ATPase | |||
| 9510 | 187 aa hypothetical protein | |||
| 9515 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M1.Ran4ORF9515P |
| 9520 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M2.Ran4ORF9515P |
| 9525 | R | RanYb2ORF9550P (100% identity) | GGATG | Ran4ORF9515P |
| 9530 | DUF4469 domain-containing protein | |||
| 9740 | DNA adenine methylase | |||
| 9745 | R | RanYb2ORF9770P (100% identity) | GATC | Ran4ORF9750P |
| 9750 | M | M.RanY11ORF9010P (100% identity) | M.Ran4ORF9750P | |
| 9755 | GTP-binding DUF697 domain-containing protein | |||