Dehalobacter species DCM |
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Putative Dehalobacter species DCM RM systems
Ref: Yang,Y. et al. unpublished
REBASE ref # 35160
Complete sequence: 4,497,720 bp
GenBank #: CP092282
REBASE acronym: DspDCM
Org_num: 61450
All begin LPY66_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 125 | BREX system P-loop protein BrxC | |||
| 130 | RM | Ckl002ORF5685P (54% identity) | DspDCMORF130P | |
| 135 | BREX-1 system phosphatase PglZ type A | |||
| 650 | helix-turn-helix transcriptional regulator | |||
| 655 | V | V.Ast17244ORF884P (64% identity) | V.DspDCMORF660P | |
| 660 | M | M1.Oba2ORF4500P (68% identity) | M1.DspDCMORF660P | |
| 665 | M | M.PmeBin706ORFAP (31% identity) | M2.DspDCMORF660P | |
| 670 | R | Oba2ORF4500P (21% identity) | DspDCMORF660P | |
| 675 | DEAD/DEAH box helicase family protein | |||
| 845 | site-specific integrase | |||
| 850 | M | M.Cma2767ORF26580P (62% identity) | M.DspDCMORF850P | |
| 855 | site-specific DNA-methyltransferase | |||
| 850 | DNA cytosine methyltransferase | |||
| 855 | M | M.Yfr2321ORF211065P (88% identity) | M.DspDCMORF855P | |
| 860 | methionine adenosyltransferase | |||
| 960 | ATP-dependent helicase | |||
| 965 | M | M.Csp502ORF5310P (72% identity) | M.DspDCMORF965P | |
| 970 | site-specific DNA-methyltransferase | |||
| 975 | DEAD/DEAH box helicase family protein | |||
| 980 | V | V.DspTolMORF12210P (68% identity) | V.DspDCMORF965P | |
| 985 | R | PspMY03ORF33205P (32% identity) | DspDCMORF965P | |
| 990 | AAA family ATPase | |||
| 1040 | 67 aa hypothetical protein | |||
| 1045 | M | M.Ddi21439ORF1710P (94% identity) | M.DspDCMORF1045P | |
| 1050 | 144 aa hypothetical protein | |||
| 1170 | DUF4406 domain-containing protein | |||
| 1175 | M | M.Ddi21439ORF1733P (86% identity) | M.DspDCMORF1175P | |
| 1180 | site-specific integrase | |||
| 1525 | 53 aa hypothetical protein | |||
| 1530 | M | M.DspOTORF600P (65% identity) | M.DspDCMORF1530P | |
| 1535 | site-specific integrase | |||
| 4185 | 538 aa hypothetical protein | |||
| 4190 | M | M.Cde4135ORF3357P (74% identity) | M.DspDCMORF4190P | |
| 4195 | R | CthTA2ORF835P (72% identity) | DspDCMORF4190P | |
| 4205 | 65 aa hypothetical protein | |||
| 13635 | ATP-binding protein | |||
| 13640 | M | M.SflN107ORF20020P (53% identity) | M.DspDCMORF13640P | |
| 13645 | V | V.Abr4035ORF17350P (24% identity) | V.DspDCMORF13640P | |
| 13650 | serine/threonine protein kinase | |||
| 13755 | 126 aa hypothetical protein | |||
| 13760 | V | V.Dre12DCAORF10665P (83% identity) | V.DspDCMORF13775P | |
| 13765 | H | H.Dre12DCAORF10665P (100% identity) | H.DspDCMORF13775P | |
| 13770 | R | Dre12DCAORF10665P (100% identity) | DspDCMORF13775P | |
| 13775 | M | M.Dre12DCAORF10665P (98% identity) | M.DspDCMORF13775P | |
| 13780 | helix-turn-helix transcriptional regulator | |||
| 13975 | site-specific integrase | |||
| 13980 | M | M.Ddi21439ORF1341P (92% identity) | M.DspDCMORF13980P | |
| 13985 | 186 aa hypothetical protein | |||
| 14100 | 151 aa hypothetical protein | |||
| 14105 | M | M.ManMMFC1ORF3087P (97% identity) | M.DspDCMORF14105P | |
| 14110 | 66 aa hypothetical protein | |||
| 14895 | primosomal protein N | |||
| 14900 | M | M.DspDHBORF1723P (54% identity) | M.DspDCMORF14900P | |
| 14905 | phosphoribosylamine--glycine ligase | |||
| 15900 | 268 aa hypothetical protein | |||
| 15905 | RM | Cca10913ORF4232P (36% identity) | DspDCMORF15905P | |
| 15910 | PspA/IM30 family protein | |||
| 18305 | Holliday junction endonuclease | |||
| 18310 | M | M.DspSB140ORFHP (75% identity) | M.DspDCMORF18310P | |
| 18315 | 63 aa hypothetical protein | |||
| 18315 | 63 aa hypothetical protein | |||
| 18320 | M | M.Csp7D4C2ORF6275P (58% identity) | M.DspDCMORF18320P | |
| 18325 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 965 | DNA cytosine methyltransferase | |||
| 970 | M | M.Hsp2008ORF11683P (54% identity) | M.DspDCMORF970P | |
| 975 | R | DspTolMORF12215P (83% identity) | DspDCMORF970P | |
| 980 | very short patch repair endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13610 | EcsC family protein | |||
| 13615 | R | DspDCMMcrCP (76% identity) | DspDCMMcrC2P | |
| 13620 | R | DspDCMMcrBP (76% identity) | DspDCMMcrB2P | |
| 13625 | 196 aa hypothetical protein | |||
| 14130 | 345 aa hypothetical protein | |||
| 14135 | R | Ddi21439McrCP (100% identity) | DspDCMMcrCP | |
| 14140 | R | Ddi21439McrBP (100% identity) | DspDCMMcrBP | |
| 14145 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||