Escherichia coli p11B |
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Putative Escherichia coli p11B RM systems
Ref: Shropshire,W.C. et al. J Antimicrob Chemother 76 (2), 385-395 (2021)
REBASE ref # 35196
| Sequence length: | GenBank #: | |
| Chromosome: | 5,295,156 bp | CP103755 |
| plasmid unnamed1: | 180,962 bp | CP103756 |
| plasmid unnamed2: | 70,739 bp | CP103757 |
REBASE acronym: Ecop11B
Org_num: 61578
All begin NYO14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19955 | type IV toxin-antitoxin system AbiEi family | |||
| 19960 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Ecop11BORF19965P |
| 19965 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Ecop11BORF19965P |
| 19970 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Ecop11BORF19965P |
| 19975 | ash family protein | |||
| 21780 | restriction endonuclease | |||
| 21785 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Ecop11BORF21785P |
| 21790 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Ecop11BORF21785P |
| 21795 | R | Ecop11AORF21570P (100% identity) | RTACNNNNGTG | Ecop11BORF21785P |
| 21800 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecop11BDamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecop11BORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 6080 | PerC family transcriptional regulator | |||
| 6085 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Ecop11BORF6085P |
| 6090 | LexA family transcriptional regulator | |||
| 6125 | 95 aa hypothetical protein | |||
| 6130 | M | M.EcosR6ORF7985P (100% identity) | M.Ecop11BORF6130P | |
| 6135 | phage lysis protein EssD | |||
| 6260 | 257 aa hypothetical protein | |||
| 6265 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Ecop11BORF6265P |
| 6270 | R | Sso8033ORF3755P (100% identity) | CCWGG | Ecop11BORF6265P |
| 6275 | 121 aa hypothetical protein | |||
| 10060 | phosphohydrolase | |||
| 10065 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecop11BDcmP |
| 10070 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecop11BDcmP |
| 10075 | drug/metabolite exporter YedA | |||
| 10945 | antitermination protein | |||
| 10950 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.Ecop11BORF10950P |
| 10955 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.Ecop11BORF10950P |
| 10960 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R2.Ecop11BORF10950P |
| 10965 | TrmB family transcriptional regulator | |||
| 14205 | DUF3927 family protein | |||
| 14220 | M | M.EcosS9ORF10680P (100% identity) | A | M.Ecop11BORF14220P |
| 14225 | TrmB family transcriptional regulator | |||
| 16475 | helix-turn-helix domain-containing protein | |||
| 16480 | M | M.KpnYN1ORFGP (89% identity) | M.Ecop11BORF16480P | |
| 16485 | 71 aa hypothetical protein | |||
| 23435 | response regulator receiver domain | |||
| 23440 | R | EcosS3ORF15775P (100% identity) | Ecop11BORF23445P | |
| 23445 | M | M.EcosS3ORF15775P (100% identity) | M.Ecop11BORF23445P | |
| 23450 | conjugal transfer protein TraG N-terminal | |||
| plasmid unnamed1 | ||||
| 26225 | 103 aa hypothetical protein | |||
| 26230 | M | M.KpnVA569ORF28145P (100% identity) | M.Ecop11BORF26230P | |
| 26235 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27290 | 103 aa hypothetical protein | |||
| 27295 | M | M.Ecop11AORF26250P (100% identity) | M.Ecop11BORF27295P | |
| 27300 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21775 | BrnT family toxin | |||
| 21780 | R | Ecou021MrrP (100% identity) | Ecop11BMrrP | |
| 21785 | type I restriction-modification system subunit | |||
| 22115 | glycosyltransferase | |||
| 22120 | R | EcosS3McrBP (100% identity) | Ecop11BMcrBP | |
| 22125 | R | EcosS9McrCP (100% identity) | Ecop11BMcrCP | |
| 22130 | Alw26I/Eco31I/Esp3I family type II restriction | |||