Escherichia coli O25b:H4-ST131 4433 |
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Putative Escherichia coli O25b:H4-ST131 4433 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
Complete sequence: 5,386,924 bp
GenBank #: CP103672
REBASE acronym: Eco4433
Org_num: 61559
All begin M5S92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20470 | type IV toxin-antitoxin system AbiEi family | |||
| 20475 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco4433ORF20480P |
| 20480 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco4433ORF20480P |
| 20485 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco4433ORF20480P |
| 20490 | ash family protein | |||
| 22295 | restriction endonuclease | |||
| 22300 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco4433ORF22300P |
| 22305 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco4433ORF22300P |
| 22310 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco4433ORF22300P |
| 22315 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1695 | cell division protein DamX | |||
| 1700 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4433DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco4433ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 6090 | PerC family transcriptional regulator | |||
| 6095 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco4433ORF6095P |
| 6100 | LexA family transcriptional regulator | |||
| 6135 | 95 aa hypothetical protein | |||
| 6140 | M | M.EcosR6ORF7985P (100% identity) | M.Eco4433ORF6140P | |
| 6145 | phage lysis protein EssD | |||
| 6270 | 257 aa hypothetical protein | |||
| 6275 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco4433ORF6275P |
| 6280 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco4433ORF6275P |
| 6285 | 121 aa hypothetical protein | |||
| 10825 | phosphohydrolase | |||
| 10830 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco4433DcmP |
| 10835 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco4433DcmP |
| 10840 | drug/metabolite exporter YedA | |||
| 11710 | antitermination protein | |||
| 11715 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.Eco4433ORF11715P |
| 11720 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.Eco4433ORF11715P |
| 11725 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R2.Eco4433ORF11715P |
| 11730 | TrmB family transcriptional regulator | |||
| 14705 | DUF3927 family protein | |||
| 14720 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco4433ORF14720P |
| 14725 | TrmB family transcriptional regulator | |||
| 16990 | helix-turn-helix domain-containing protein | |||
| 16995 | M | M.KpnYN1ORFGP (89% identity) | M.Eco4433ORF16995P | |
| 17000 | 71 aa hypothetical protein | |||
| 23955 | response regulator receiver domain | |||
| 23960 | R | EcosS3ORF15775P (100% identity) | Eco4433ORF23965P | |
| 23965 | M | M.EcosS3ORF15775P (100% identity) | M.Eco4433ORF23965P | |
| 23970 | conjugal transfer protein TraG N-terminal | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10335 | shufflon system plasmid conjugative transfer | |||
| 10340 | R | Ecost88ORF24685P (100% identity) | Eco4433ORF10345P | |
| 10345 | M | M.EcosS2ORF3675P (100% identity) | M.Eco4433ORF10345P | |
| 10350 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22290 | BrnT family toxin | |||
| 22295 | R | Ecou021MrrP (100% identity) | Eco4433MrrP | |
| 22300 | type I restriction-modification system subunit | |||
| 22630 | glycosyltransferase | |||
| 22635 | R | EcosS3McrBP (100% identity) | Eco4433McrBP | |
| 22640 | R | EcosS9McrCP (100% identity) | Eco4433McrCP | |
| 22645 | Alw26I/Eco31I/Esp3I family type II restriction | |||