Escherichia coli 3090 |
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Putative Escherichia coli 3090 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,896,043 bp | CP103745 |
| plasmid pMB2791_1: | 120,324 bp | CP103746 |
| plasmid pMB2791_2: | 89,420 bp | CP103747 |
| plasmid pMB2791_3: | 50,937 bp | CP103748 |
REBASE acronym: Eco3090
Org_num: 61519
All begin M5T02_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3090DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2285 | 26 aa hypothetical protein | |||
| 2290 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco3090ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 15515 | replication endonuclease | |||
| 15520 | M | M.EcosBORF4330P (100% identity) | GATC | M.Eco3090ORF15520P |
| 15525 | TraR/DksA family transcriptional regulator | |||
| 18570 | LexA family transcriptional regulator | |||
| 18575 | M | M.Sso8ORF17910P (100% identity) | GATC | M.Eco3090ORF18575P |
| 18580 | PerC family transcriptional regulator | |||
| 20415 | HNH endonuclease | |||
| 20420 | R | Sso8ORF19860P (100% identity) | Eco3090ORF20420P | |
| 20425 | 55 aa hypothetical protein | |||
| plasmid pMB2791_1 | ||||
| 24165 | 73 aa hypothetical protein | |||
| 24170 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco3090ORF24170P |
| 24175 | 103 aa hypothetical protein | |||
| plasmid pMB2791_2 | ||||
| 24775 | 97 aa hypothetical protein | |||
| 24780 | M | M.Xca80ORFEP (100% identity) | M.Eco3090ORF24780P | |
| 24785 | 73 aa hypothetical protein | |||
| plasmid pMB2791_3 | ||||
| 24915 | 103 aa hypothetical protein | |||
| 24920 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco3090ORF24920P | |
| 24925 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18365 | DinI family protein | |||
| 18370 | R | EcosEC29GmrSDP (100% identity) | Eco3090GmrSDP | |
| 18375 | recombinase family protein | |||