Escherichia coli 5444 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 5444 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,027 bp | CP103515 |
| plasmid pMB9292_1: | 198,645 bp | CP103516 |
REBASE acronym: Eco5444
Org_num: 61534
All begin M5S96_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | cell division protein DamX | |||
| 1675 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5444DamP |
| 1680 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco5444ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 8920 | phosphohydrolase | |||
| 8925 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco5444DcmP |
| 8930 | V | V.SflSTLE1DcmP (100% identity) | V.Eco5444DcmP | |
| 8935 | drug/metabolite exporter YedA | |||
| 10950 | DUF977 family protein | |||
| 10955 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco5444ORF10955P | |
| 10960 | IS66-like element ISEc22 family transposase | |||
| 12725 | DUF3927 family protein | |||
| 12740 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco5444ORF12740P |
| 12745 | TrmB family transcriptional regulator | |||
| 19705 | HNH endonuclease | |||
| 19710 | R | SflSTLE4ORF19250P (100% identity) | Eco5444ORF19710P | |
| 19715 | McrC family protein | |||
| 20080 | sigma 54-interacting transcriptional regulator | |||
| 20085 | R | Ecop10BORF20145P (100% identity) | Eco5444ORF20085P | |
| 20090 | IS21-like element IS100 family transposase | |||
| plasmid pMB9292_1 | ||||
| 23435 | 103 aa hypothetical protein | |||
| 23440 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco5444ORF23440P | |
| 23445 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19710 | HNH endonuclease | |||
| 19715 | R | SflSTLE4McrCP (100% identity) | Eco5444McrCP | |
| 19720 | R | SflSTLE4McrBP (100% identity) | Eco5444McrBP | |
| 19725 | DUF4942 domain-containing protein | |||