Parabacteroides distasonis BFG-149 |
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Putative Parabacteroides distasonis BFG-149 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,335,774 bp
GenBank #: CP103148
REBASE acronym: Pdi149
Org_num: 61799
All begin NXX59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12300 | 132 aa hypothetical protein | |||
| 12305 | S | S3.PdiPdIVP (99% identity) | S4.Pdi149ORF12330P | |
| 12310 | S | S4.Pdi157ORF12475P (33% identity) | S3.Pdi149ORF12330P | |
| 12315 | tyrosine-type recombinase/integrase | |||
| 12320 | S | S2.PdiPdIV (100% identity) | CAAYNNNNNNNTGG | S2.Pdi149ORF12330P |
| 12325 | S | S1.Pdi157ORF12475P (100% identity) | S1.Pdi149ORF12330P | |
| 12330 | M | M.PdiPdIV (100% identity) | M.Pdi149ORF12330P | |
| 12335 | R | PdiPdIVP (100% identity) | Pdi149ORF12330P | |
| 12340 | C | C.PdiPdIVP (100% identity) | C.Pdi149ORF12330P | |
| 12345 | TIR domain-containing protein | |||
| 12420 | AAA family ATPase | |||
| 12425 | M | M.Pdi157ORF12575P (100% identity) | M.Pdi149ORF12425P | |
| 12430 | metallophosphoesterase | |||
| 12470 | DUF6078 family protein | |||
| 12475 | R | Pdi157ORF12640P (100% identity) | Pdi149ORF12490P | |
| 12480 | S | S.Pdi157ORF12640P (100% identity) | S.Pdi149ORF12490P | |
| 12485 | AAA family ATPase | |||
| 12490 | M | M.Pdi157ORF12640P (100% identity) | M.Pdi149ORF12490P | |
| 12495 | GIY-YIG nuclease family protein | |||
| 17405 | 132 aa hypothetical protein | |||
| 17410 | S | S2.PdiS2PDORF3300P (58% identity) | S3.Pdi149ORF17465P | |
| 17415 | 134 aa hypothetical protein | |||
| 17420 | transposase | |||
| 17425 | 455 aa hypothetical protein | |||
| 17430 | IS1380 family transposase | |||
| 17435 | tyrosine-type recombinase/integrase | |||
| 17440 | S | S3.PdiS2PDORF3300P (59% identity) | S2.Pdi149ORF17465P | |
| 17445 | S | S1.PdiS2PDORF3300P (97% identity) | S1.Pdi149ORF17465P | |
| 17450 | 143 aa hypothetical protein | |||
| 17455 | 141 aa hypothetical protein | |||
| 17460 | virulence RhuM family protein | |||
| 17465 | M | M.PdiS2PDORF3300P (100% identity) | M.Pdi149ORF17465P | |
| 17470 | R | PdiS2PDORF3300P (100% identity) | Pdi149ORF17465P | |
| 17475 | C | C.PdiS2PDORF3300P (100% identity) | C.Pdi149ORF17465P | |
| 17480 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13205 | 401 aa hypothetical protein | |||
| 13210 | RM | Pdi157ORF13375P (80% identity) | Pdi149ORF13210P | |
| 13215 | site-specific integrase | |||
| 15230 | DUF6383 domain-containing protein | |||
| 15235 | M | M.PmeBin29ORFBP (100% identity) | CCWGG | M.Pdi149ORF15235P |
| 15240 | helix-turn-helix domain-containing protein | |||
| 15245 | R | PspCT06IIP (100% identity) | CCWGG | Pdi149ORF15235P |
| 15250 | PCMD domain-containing protein | |||
| 16645 | fructose-6-phosphate aldolase | |||
| 16650 | M | M.Pdi157ORF16875P (100% identity) | CGCG | M.Pdi149ORF16650P |
| 16655 | TolB-like 6-bladed beta-propeller | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12265 | mobilization protein | |||
| 12270 | R | Pdi157MrrP (100% identity) | Pdi149MrrP | |
| 12275 | helix-turn-helix domain-containing protein | |||