Salmonella enterica s15D023 |
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Putative Salmonella enterica s15D023 RM systems
Ref: Du,P. et al. mSystems, e0025322 (2022) In press
REBASE ref # 35096
| Sequence length: | GenBank #: | |
| Chromosome: | 4,749,496 bp | CP101340 |
| plasmid ps15D023_3: | 36,758 bp | CP101342 |
| plasmid ps15D023-IncHI2: | 195,413 bp | CP101341 |
REBASE acronym: Sen15D023
Org_num: 61146
All begin NMV07_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 430 | ribulose-phosphate 3-epimerase | |||
| 435 | M | M.StyTDamP (100% identity) | GATC | M.Sen15D023DamP |
| 440 | cell division protein DamX | |||
| 5295 | malate transporter | |||
| 5300 | R | SenV2ORF20065P (100% identity) | Sen15D023ORF5300P | |
| 5305 | TnsA endonuclease N-terminal domain-containing | |||
| 5340 | DUF2220 domain-containing protein | |||
| 5345 | R | Sensp14178ORF19855P (100% identity) | Sen15D023ORF5345P | |
| 5350 | YebC/PmpR family DNA-binding transcriptional | |||
| 7520 | 74 aa hypothetical protein | |||
| 7525 | M | M.SenSI196ORF17855P (100% identity) | GATC | M1.Sen15D023ORF7525P |
| 7530 | M | M.SenSI196ORF17850P (100% identity) | M2.Sen15D023ORF7525P | |
| 7535 | regulator | |||
| plasmid ps15D023_3 | ||||
| 24285 | DNA-binding transcriptional regulator Fis | |||
| 24290 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen15D023ORF24290P |
| 24295 | DUF2556 family protein | |||
| plasmid ps15D023-IncHI2 | ||||
| 23630 | 55 aa hypothetical protein | |||
| 23635 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen15D023ORF23635P |
| 23640 | thermonuclease family protein | |||
| 24030 | 48 aa hypothetical protein | |||
| 24035 | M | M.YpsF1ORFBP (100% identity) | M.Sen15D023ORF24035P | |
| 24040 | 202 aa hypothetical protein | |||
| 24145 | DNA-binding protein | |||
| 24150 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen15D023ORF24150P |
| 24155 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5250 | integrase arm-type DNA-binding domain-containing | |||
| 5255 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | Sen15D023ORF5260P |
| 5260 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.Sen15D023ORF5260P |
| 5265 | S8 family peptidase | |||
| 8280 | MFS transporter | |||
| 8285 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.Sen15D023ORF8285P |
| 8290 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sen15D023ORF8285P |
| 8295 | small effector SsaA | |||