Salmonella enterica IndS104 |
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Putative Salmonella enterica IndS104 RM systems
Ref: Du,P. et al. mSystems, e0025322 (2022) In press
REBASE ref # 35096
| Sequence length: | GenBank #: | |
| Chromosome: | 4,616,636 bp | CP101355 |
| plasmid pIndS104-CTX: | 322,681 bp | CP101356 |
REBASE acronym: Sen104
Org_num: 61143
All begin NMV04_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen104DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen104ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 3170 | DUF3850 domain-containing protein | |||
| 3175 | M | M.SspZ54ORF6040P (100% identity) | GATC | M.Sen104ORF3175P |
| 3180 | replication endonuclease | |||
| 9310 | phosphohydrolase | |||
| 9315 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen104DcmP |
| 9320 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.Sen104DcmP |
| 9325 | drug/metabolite exporter YedA | |||
| 10760 | 55 aa hypothetical protein | |||
| 10765 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen104ORF10765P |
| 10770 | thermonuclease family protein | |||
| 19200 | YebC/PmpR family DNA-binding transcriptional | |||
| 19205 | R | Sensp14178ORF19855P (100% identity) | Sen104ORF19205P | |
| 19210 | DUF2220 domain-containing protein | |||
| 19245 | TnsA endonuclease N-terminal domain-containing | |||
| 19250 | R | SenV2ORF20065P (100% identity) | Sen104ORF19250P | |
| 19255 | malate transporter | |||
| plasmid pIndS104-CTX | ||||
| 23350 | 277 aa hypothetical protein | |||
| 23355 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen104ORF23355P |
| 23360 | DNA-binding protein | |||
| 23465 | 202 aa hypothetical protein | |||
| 23470 | M | M.YpsF1ORFBP (100% identity) | M.Sen104ORF23470P | |
| 23475 | 48 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16580 | small effector SsaA | |||
| 16585 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sen104ORF16590P |
| 16590 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.Sen104ORF16590P |
| 16595 | MFS transporter | |||