Escherichia coli MB15 |
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Putative Escherichia coli MB15 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,779,067 bp | CP073984 |
| plasmid pYLMB15a: | 247,187 bp | CP073985 |
| plasmid pYLMB15b: | 108,307 bp | CP073986 |
REBASE acronym: EcoMB15
Org_num: 60919
All begin KFU92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3795 | 184 aa hypothetical protein | |||
| 3800 | R | Efe1ORFEP (99% identity) | EcoMB15ORF3810P | |
| 3805 | S | S.Val17749ORF2031P (79% identity) | S.EcoMB15ORF3810P | |
| 3810 | M | M.Sen775WIII (99% identity) | M.EcoMB15ORF3810P | |
| 3815 | DUF262 domain-containing protein | |||
| 20265 | DUF45 domain-containing protein | |||
| 20270 | M | M.Ecostr10ORF18570P (100% identity) | M.EcoMB15ORF20270P | |
| 20275 | S | S.Ecostr10ORF18570P (100% identity) | S.EcoMB15ORF20270P | |
| 20280 | 61 aa hypothetical protein | |||
| plasmid pYLMB15b | ||||
| 24835 | type II toxin-antitoxin system Phd/YefM family | |||
| 24840 | M | M.EcoPSS10ORF26960P (100% identity) | M.EcoMB15ORF24840P | |
| 24845 | S | S.EcoLR48ORF43930P (69% identity) | S.EcoMB15ORF24840P | |
| 24850 | R | EcoRA119ORF26420P (100% identity) | EcoMB15ORF24840P | |
| 24855 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | cell division protein DamX | |||
| 1690 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB15DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoMB15ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 9425 | TrmB family transcriptional regulator | |||
| 9430 | M | M.EfeC23ORF5790P (100% identity) | M.EcoMB15ORF9430P | |
| 9435 | phage holin, lambda family | |||
| 9660 | phosphohydrolase | |||
| 9665 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoMB15DcmP |
| 9670 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMB15DcmP |
| 9675 | drug/metabolite exporter YedA | |||
| plasmid pYLMB15a | ||||
| 24325 | 48 aa hypothetical protein | |||
| 24330 | M | M.YpsF1ORFBP (100% identity) | M.EcoMB15ORF24330P | |
| 24335 | 202 aa hypothetical protein | |||
| 24455 | DNA-binding protein | |||
| 24460 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoMB15ORF24460P |
| 24465 | 284 aa hypothetical protein | |||
| plasmid pYLMB15b | ||||
| 24600 | IS3-like element IS3 family transposase | |||
| 24605 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoMB15ORF24605P |
| 24610 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYLMB15b | ||||
| 24715 | modulator protein | |||
| 24720 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.EcoMB15ORF24720P |
| 24725 | R | Sen68045ORF16165P (100% identity) | AGACC | EcoMB15ORF24720P |
| 24730 | maturation control protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18215 | 89 aa hypothetical protein | |||
| 18220 | R | EcoF829GmrSDP (100% identity) | EcoMB15GmrSDP | |
| 18225 | recombinase family protein | |||