Escherichia coli MB57 |
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Putative Escherichia coli MB57 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,681,356 bp | CP073932 |
| plasmid pYLMB57a: | 85,429 bp | CP073933 |
REBASE acronym: EcoMB57
Org_num: 60933
All begin KFU62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11090 | M48 family metallopeptidase | |||
| 11095 | R | Sen59ORF24615P (100% identity) | TAAGNNNNNCTG | EcoMB57ORF11105P |
| 11100 | S | S.Kpns229ORF25440P (100% identity) | TAAGNNNNNCTG | S.EcoMB57ORF11105P |
| 11105 | M | M.Eco6474ORF10705P (100% identity) | TAAGNNNNNCTG | M.EcoMB57ORF11105P |
| 11110 | IS3 family transposase | |||
| 19920 | AAA family ATPase | |||
| 19925 | S | S.EcosEC2ORF410P (100% identity) | CTANNNNNNCTTC | S.EcoMB57ORF19930P |
| 19930 | M | M.EcoMB51ORF3935P (100% identity) | CTANNNNNNCTTC | M.EcoMB57ORF19930P |
| 19935 | R | EcoMB51ORF3935P (100% identity) | CTANNNNNNCTTC | EcoMB57ORF19930P |
| 19940 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1730 | cell division protein DamX | |||
| 1735 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB57DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoMB57ORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 8590 | phosphohydrolase | |||
| 8595 | M | M.SspS13DcmP (99% identity) | CCWGG | M.EcoMB57DcmP |
| 8600 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMB57DcmP |
| 8605 | drug/metabolite exporter YedA | |||
| 10690 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoMB57ORF10695P | |
| 10700 | IS66-like element ISEc22 family transposase | |||
| 18825 | HNH endonuclease | |||
| 18830 | R | SflSTLE4ORF19250P (100% identity) | EcoMB57ORF18830P | |
| 18835 | McrC family protein | |||
| plasmid pYLMB57a | ||||
| 22365 | IS5-like element ISKpn26 family transposase | |||
| 22370 | R | Ubap201ORF4P (46% identity) | CCWGG | EcoMB57ORF22375P |
| 22375 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoMB57ORF22375P |
| 22380 | IS1 family transposase | |||
| 22475 | 102 aa hypothetical protein | |||
| 22480 | M | M.SenST46ORF25580P (100% identity) | M.EcoMB57ORF22480P | |
| 22485 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18830 | HNH endonuclease | |||
| 18835 | R | SflSTLE4McrCP (100% identity) | EcoMB57McrCP | |
| 18840 | R | SflSTLE4McrBP (100% identity) | EcoMB57McrBP | |
| 18845 | DUF4942 domain-containing protein | |||