Yersinia pestis 20 |
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Putative Yersinia pestis 20 RM systems
Ref: Tang,D. et al. Vector Borne Zoonotic Dis (2022) In press
REBASE ref # 35002
| Sequence length: | GenBank #: | |
| Chromosome: | 4,636,015 bp | CP084343 |
| plasmid unnamed3: | 77,493 bp | CP084346 |
REBASE acronym: Ype20
Org_num: 60779
All begin LDH65_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18730 | type VI secretion system baseplate subunit TssG | |||
| ??? | R | YpeRORF16950P (100% identity) | CCWGG | Ype20ORF18745P |
| 18745 | M | M.YpeZORF386P (100% identity) | CCWGG | M.Ype20ORF18745P |
| 18750 | transposase | |||
| 19895 | ribulose-phosphate 3-epimerase | |||
| 19900 | M | M.Ysi228DamP (100% identity) | GATC | M.Ype20DamP |
| 19905 | SPOR domain-containing protein | |||
| plasmid unnamed3 | ||||
| 21710 | 73 aa hypothetical protein | |||
| 21715 | M | M.YpeZORF72P (100% identity) | M.Ype20ORF21715P | |
| 21720 | 66 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18750 | transposase | |||
| 18755 | R | YpeZMcrCP (100% identity) | Ype20McrCP | |
| 18760 | R | YpeZMcrBP (100% identity) | Ype20McrBP | |
| 18765 | IS21-like element IS100 family transposase | |||