Yersinia pestis 94 |
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Putative Yersinia pestis 94 RM systems
Ref: Tang,D. et al. Vector Borne Zoonotic Dis (2022) In press
REBASE ref # 35002
| Sequence length: | GenBank #: | |
| Chromosome: | 4,647,610 bp | CP084339 |
| plasmid unnamed1: | 100,977 bp | CP084340 |
REBASE acronym: Ype94
Org_num: 60780
All begin LDH63_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 980 | SPOR domain-containing protein | |||
| 985 | M | M.Ysi228DamP (100% identity) | GATC | M.Ype94DamP |
| 990 | ribulose-phosphate 3-epimerase | |||
| 16930 | type VI secretion system baseplate subunit TssG | |||
| ??? | R | YpeRORF16950P (100% identity) | CCWGG | Ype94ORF16945P |
| 16945 | M | M.YpeZORF386P (100% identity) | CCWGG | M.Ype94ORF16945P |
| 16950 | transposase | |||
| plasmid unnamed1 | ||||
| 21185 | 66 aa hypothetical protein | |||
| 21190 | M | M.YpeZORF72P (100% identity) | M.Ype94ORF21190P | |
| 21195 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16950 | transposase | |||
| 16955 | R | YpeZMcrCP (100% identity) | Ype94McrCP | |
| 16960 | R | YpeZMcrBP (100% identity) | Ype94McrBP | |
| 16965 | IS21-like element IS100 family transposase | |||