Yersinia pestis R |
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Putative Yersinia pestis R RM systems
Ref: Tang,D. et al. Vector Borne Zoonotic Dis (2022) In press
REBASE ref # 35002
| Sequence length: | GenBank #: | |
| Chromosome: | 4,648,824 bp | CP084336 |
| plasmid unnamed1: | 130,936 bp | CP084337 |
REBASE acronym: YpeR
Org_num: 60781
All begin LDH64_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 980 | SPOR domain-containing protein | |||
| 985 | M | M.Ysi228DamP (100% identity) | GATC | M.YpeRDamP |
| 990 | ribulose-phosphate 3-epimerase | |||
| 16935 | type VI secretion system baseplate subunit TssG | |||
| ??? | R | YpeM2085ORF1850P (100% identity) | CCWGG | YpeRORF16950P |
| 16950 | M | M.YpeZORF386P (100% identity) | CCWGG | M.YpeRORF16950P |
| 16955 | transposase | |||
| plasmid unnamed1 | ||||
| 20935 | 66 aa hypothetical protein | |||
| 20940 | M | M.YpeZORF72P (100% identity) | M.YpeRORF20940P | |
| 20945 | 73 aa hypothetical protein | |||
| 21485 | 66 aa hypothetical protein | |||
| 21490 | M | M.YpeZORF72P (100% identity) | M.YpeRORF21490P | |
| 21495 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16955 | transposase | |||
| 16960 | R | YpeZMcrCP (100% identity) | YpeRMcrCP | |
| 16965 | R | YpeZMcrBP (100% identity) | YpeRMcrBP | |
| 16970 | IS21-like element IS100 family transposase | |||