Salmonella enterica subsp. enterica serovar Mbandaka SMEH |
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Putative Salmonella enterica subsp. enterica serovar Mbandaka SMEH RM systems
Ref: Zhou,A. unpublished
REBASE ref # 30678
Complete sequence: 4,837,568 bp
GenBank #: CP101689
REBASE acronym: SenSMEH
Org_num: 60768
All begin NOV91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14010 | helix-turn-helix domain-containing protein | |||
| 14015 | M | M.SenXB08ORF21250P (100% identity) | M.SenSMEHORF14015P | |
| 14020 | S | S.SenXB08ORF21250P (100% identity) | S.SenSMEHORF14015P | |
| 14025 | RecQ family ATP-dependent DNA helicase | |||
| 14030 | DNA-protecting protein DprA | |||
| 14035 | R | SenXB08ORF21250P (100% identity) | SenSMEHORF14015P | |
| 14040 | SPI-4 type I secretion system auxiliary protein | |||
| 15480 | endoribonuclease SymE | |||
| 15485 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.SenSMEHORF15490P |
| 15490 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.SenSMEHORF15490P |
| 15495 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | SenSMEHORF15490P |
| 15500 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2220 | drug/metabolite exporter YedA | |||
| 2225 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenSMEHDcmP |
| 2230 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.SenSMEHDcmP |
| 2235 | phosphohydrolase | |||
| 4615 | 175 aa hypothetical protein | |||
| 4620 | M | M.SenXB08ORF7110P (100% identity) | M.SenSMEHORF4620P | |
| 4625 | 67 aa hypothetical protein | |||
| 6270 | 470 aa hypothetical protein | |||
| 6275 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.SenSMEHORF6275P |
| 6280 | zinc ribbon domain-containing protein | |||
| 9435 | DNA-binding transcriptional regulator Fis | |||
| 9440 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSMEHORF9440P |
| 9445 | DUF2556 family protein | |||
| 9925 | ribulose-phosphate 3-epimerase | |||
| 9930 | M | M.StyTDamP (100% identity) | GATC | M.SenSMEHDamP |
| 9935 | cell division protein DamX | |||
| 12915 | replication endonuclease | |||
| 12920 | M | M.SspS13ORF1655P (100% identity) | GTCGAC | M.SenSMEHORF12920P |
| 12925 | R | SspS13ORF1655P (100% identity) | GTCGAC | R1.SenSMEHORF12920P |
| 12930 | R | R1.SenXB08ORF22340P (100% identity) | GTCGAC | R2.SenSMEHORF12920P |
| 12935 | phage portal protein | |||
| 15325 | 97 aa hypothetical protein | |||
| 15330 | R | SenXB08ORF19940P (100% identity) | SenSMEHORF15330P | |
| 15335 | 307 aa hypothetical protein | |||
| 15340 | response regulator receiver domain | |||
| 15345 | R | SenXB08ORF19920P (100% identity) | RCCGGY | SenSMEHORF15350P |
| 15350 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.SenSMEHORF15350P |
| 15355 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17785 | MFS transporter | |||
| 17790 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.SenSMEHORF17790P |
| 17795 | R | SspA292ORF17210P (100% identity) | CAGAG | SenSMEHORF17790P |
| 17800 | small effector SsaA | |||