Escherichia coli CEC13002 |
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Putative Escherichia coli CEC13002 RM systems
Ref: Hayashi,T. and Miyata,T. unpublished
REBASE ref # 34954
| Sequence length: | GenBank #: | |
| Chromosome: | 5,385,437 bp | AP026116 |
| plasmid pCEC13002_1: | 93,804 bp | AP026117 |
REBASE acronym: Eco13002
Org_num: 60622
All begin CEC13002_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 50790 | endoribonuclease SymE | |||
| 50800 | S | S.EcosPA8ORF17615P (99% identity) | CACNNNNNNNCTGG | S.Eco13002ORF50810P |
| 50810 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco13002ORF50810P |
| 50820 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco13002ORF50810P |
| 50830 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15730 | 65 aa hypothetical protein | |||
| 15740 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco13002ORF15740P | |
| 15750 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 23510 | inner membrane transporter YedA | |||
| 23520 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco13002DcmP |
| 23530 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco13002DcmP |
| 23540 | phosphohydrolase | |||
| 25010 | 252 aa hypothetical protein | |||
| 25020 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco13002ORF25020P |
| 25030 | NinB protein | |||
| 30000 | antirepressor protein | |||
| 30010 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco13002ORF30010P |
| 30020 | endonuclease | |||
| 30400 | 67 aa hypothetical protein | |||
| 30410 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco13002ORF30410P |
| 30420 | 70 aa hypothetical protein | |||
| 39370 | DNA-binding protein Fis | |||
| 39380 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco13002ORF39380P |
| 39390 | acrEF/envCD operon repressor | |||
| 40370 | ribulose-phosphate 3-epimerase | |||
| 40380 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13002DamP |
| 40390 | cell division protein DamX | |||
| 47920 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco13002ORF47930P | |
| 47940 | 116 aa hypothetical protein | |||
| 50270 | 55 aa hypothetical protein | |||
| 50280 | R | EcosPA8ORF17350P (100% identity) | Eco13002ORF50280P | |
| 50290 | 107 aa hypothetical protein | |||
| 50370 | ATP-dependent helicase | |||
| 50380 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco13002ORF50380P |
| plasmid pCEC13002_1 | ||||
| 51920 | 308 aa hypothetical protein | |||
| 51930 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco13002ORF51930P | |
| 51940 | 73 aa hypothetical protein | |||