Escherichia coli 8_140198 |
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Putative Escherichia coli 8_140198 RM systems
Ref: Hayashi,T. and Miyata,T. unpublished
REBASE ref # 34954
| Sequence length: | GenBank #: | |
| Chromosome: | 5,479,903 bp | AP026087 |
| plasmid pNIID8_1: | 92,794 bp | AP026088 |
REBASE acronym: Eco40198
Org_num: 60616
All begin CL8NIID8_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 52090 | endoribonuclease SymE | |||
| 52100 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco40198ORF52110P |
| 52110 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco40198ORF52110P |
| 52120 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco40198ORF52110P |
| 52130 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11610 | endonuclease | |||
| 11620 | M | M.Ecoph2011ORFAP (100% identity) | GATC | M.Eco40198ORF11620P |
| 11630 | 121 aa hypothetical protein | |||
| 16330 | 65 aa hypothetical protein | |||
| 16340 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco40198ORF16340P | |
| 16350 | 179 aa hypothetical protein | |||
| 24720 | inner membrane transporter YedA | |||
| 24730 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco40198DcmP |
| 24740 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco40198DcmP |
| 24750 | phosphohydrolase | |||
| 26260 | 252 aa hypothetical protein | |||
| 26270 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco40198ORF26270P |
| 26280 | NinB protein | |||
| 31270 | antirepressor protein | |||
| 31280 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco40198ORF31280P |
| 31290 | endonuclease | |||
| 31640 | 67 aa hypothetical protein | |||
| 31650 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco40198ORF31650P |
| 31660 | 70 aa hypothetical protein | |||
| 40670 | DNA-binding protein Fis | |||
| 40680 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco40198ORF40680P |
| 40690 | acrEF/envCD operon repressor | |||
| 41650 | ribulose-phosphate 3-epimerase | |||
| 41660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco40198DamP |
| 41670 | cell division protein DamX | |||
| 49180 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco40198ORF49190P | |
| 49200 | 116 aa hypothetical protein | |||
| 51560 | 55 aa hypothetical protein | |||
| 51570 | R | EcosPA8ORF17350P (100% identity) | Eco40198ORF51570P | |
| 51580 | 107 aa hypothetical protein | |||
| 51640 | ATP-dependent helicase | |||
| 51650 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco40198ORF51650P |
| plasmid pNIID8_1 | ||||
| 53240 | 308 aa hypothetical protein | |||
| 53250 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco40198ORF53250P | |
| 53260 | 73 aa hypothetical protein | |||