Escherichia coli H52_982342 |
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Putative Escherichia coli H52_982342 RM systems
Ref: Hayashi,T. and Miyata,T. unpublished
REBASE ref # 34954
| Sequence length: | GenBank #: | |
| Chromosome: | 5,430,116 bp | AP026085 |
| plasmid pH52_1: | 94,178 bp | AP026086 |
REBASE acronym: Eco982342
Org_num: 60632
All begin CL8FH52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 51180 | endoribonuclease SymE | |||
| 51190 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco982342ORF51200P |
| 51200 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco982342ORF51200P |
| 51210 | R | EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | Eco982342ORF51200P |
| 51220 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16310 | 65 aa hypothetical protein | |||
| ??? | M | M.EcosPA8ORF27255P (100% identity) | M.Eco982342ORF16320P | |
| 16340 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 24040 | inner membrane transporter YedA | |||
| 24050 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco982342DcmP |
| 24060 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco982342DcmP |
| 24070 | phosphohydrolase | |||
| 30170 | repressor | |||
| 30180 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco982342ORF30180P |
| 30190 | R | Sso1099IP (100% identity) | CTGCAG | Eco982342ORF30180P |
| 30200 | 215 aa hypothetical protein | |||
| 30450 | 118 aa hypothetical protein | |||
| 30460 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco982342ORF30460P |
| 30470 | 70 aa hypothetical protein | |||
| 39500 | DNA-binding protein Fis | |||
| 39510 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco982342ORF39510P |
| 39520 | acrEF/envCD operon repressor | |||
| 40470 | ribulose-phosphate 3-epimerase | |||
| 40480 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco982342DamP |
| 40490 | cell division protein DamX | |||
| 48300 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco982342ORF48310P | |
| 48320 | 116 aa hypothetical protein | |||
| 50690 | 55 aa hypothetical protein | |||
| 50700 | R | EcosPA8ORF17350P (100% identity) | Eco982342ORF50700P | |
| 50710 | 107 aa hypothetical protein | |||
| 50770 | ATP-dependent helicase | |||
| 50780 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco982342ORF50780P |
| plasmid pH52_1 | ||||
| 52320 | 308 aa hypothetical protein | |||
| 52330 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco982342ORF52330P | |
| 52340 | 73 aa hypothetical protein | |||