Vibrio campbellii LJC013 |
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Putative Vibrio campbellii LJC013 RM systems
Ref: Liang,J. and Zhang,X.-H. unpublished
REBASE ref # 34974
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,390,368 bp | CP050470 |
| chromosome 2: | 2,063,940 bp | CP050471 |
| plasmid unnamed1: | 280,319 bp | CP050472 |
| plasmid unnamed2: | 97,344 bp | CP050473 |
REBASE acronym: VcaC013
Org_num: 60692
All begin HB762_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7790 | 392 aa hypothetical protein | |||
| 7795 | S | S.PspI52ORF4460P (50% identity) | S.VcaC013ORF7800P | |
| 7800 | M | M.VhaE385ORFBP (94% identity) | M.VcaC013ORF7800P | |
| 7805 | 126 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14750 | AAA family ATPase | |||
| 14755 | M | M.VspG11DamP (100% identity) | GATC | M.VcaC013DamP |
| 14760 | ribulose-phosphate 3-epimerase | |||
| plasmid unnamed1 | ||||
| 26360 | 153 aa hypothetical protein | |||
| 26365 | M | M.Vpa1273ORF24860P (98% identity) | M.VcaC013ORF26365P | |
| 26370 | Y-family DNA polymerase | |||
| 26395 | restriction endonuclease | |||
| 26400 | M | M.VpaS5ORFBP (98% identity) | M.VcaC013ORF26400P | |
| 26405 | HNH endonuclease | |||
| 27000 | 105 aa hypothetical protein | |||
| 27005 | M | M.Vpa1273ORF25545P (97% identity) | M.VcaC013ORF27005P | |
| 27010 | 132 aa hypothetical protein | |||
| 27075 | 119 aa hypothetical protein | |||
| 27080 | M | M.Vpa117ORF26230P (92% identity) | M.VcaC013ORF27080P | |
| 27085 | 248 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27585 | 115 aa hypothetical protein | |||
| 27590 | M | M.VcaC013ORF28065P (100% identity) | M.VcaC013ORF27590P | |
| 27595 | 95 aa hypothetical protein | |||
| 27695 | 109 aa hypothetical protein | |||
| 27700 | M | M.Van7154ORF17870P (81% identity) | M.VcaC013ORF27700P | |
| 27705 | 109 aa hypothetical protein | |||
| 28060 | 115 aa hypothetical protein | |||
| 28065 | M | M.VcaC013ORF27590P (100% identity) | M.VcaC013ORF28065P | |
| 28070 | 95 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 20770 | GNAT family N-acetyltransferase | |||
| 20775 | R | VcaC014ORF17175P (98% identity) | CNG | VcaC013ORF20775P |
| 20780 | tyrosine-type recombinase/integrase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 27825 | 86 aa hypothetical protein | |||
| 27830 | M | M.Vpa0224ORFBP (97% identity) | M.VcaC013ORF27830P | |
| 27835 | replication initiation protein | |||