Treponema putidum OMZ 835 |
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Putative Treponema putidum OMZ 835 RM systems
Ref: Chan,Y. et al. unpublished
REBASE ref # 34972
Complete sequence: 2,762,635 bp
GenBank #: CP038804
REBASE acronym: Tpu835
Org_num: 60686
All begin E4N74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 630 | magnesium chelatase | |||
| 635 | S | S1.Tde33520aORF2475P (31% identity) | S1.Tpu835ORF635P | |
| 640 | helix-turn-helix domain-containing protein | |||
| 645 | type II toxin-antitoxin system RelE/ParE family | |||
| 650 | S | S.Tpu758ORFAP (79% identity) | S2.Tpu835ORF635P | |
| 655 | type I R-M system S protein | |||
| 660 | haloacid dehalogenase-like hydrolase | |||
| 665 | R | Tpu758ORF6675P (100% identity) | Tpu835ORF635P | |
| 670 | Na+/H+ antiporter NhaC family protein | |||
| 1045 | GNAT family N-acetyltransferase | |||
| 1050 | R | Tpu846ORF1025P (99% identity) | Tpu835ORF1055P | |
| 1055 | M | M.Tpu846ORF1025P (99% identity) | M.Tpu835ORF1055P | |
| 1060 | cell filamentation protein Fic | |||
| 1065 | S | S1.TdeH22I (68% identity) | S1.Tpu835ORF1055P | |
| 1070 | type II toxin-antitoxin system RelE/ParE family | |||
| 1075 | tetratricopeptide repeat protein | |||
| 1080 | integrase | |||
| 1085 | S | S3.Tpu847ORF1695P (91% identity) | S2.Tpu835ORF1055P | |
| 1090 | S | S1.TspB152ORF210P (58% identity) | S3.Tpu835ORF1055P | |
| 1095 | ISAs1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 70 | 236 aa hypothetical protein | |||
| 75 | M | M.Tpu847ORF725P (99% identity) | M.Tpu835ORF75P | |
| 80 | MFS transporter | |||
| 905 | N-acetyltransferase | |||
| 910 | RM | Tpu846ORF880P (98% identity) | Tpu835ORF910P | |
| 915 | YitT family protein | |||
| 2935 | 288 aa hypothetical protein | |||
| 2940 | M | M.Tpu847ORF3645P (98% identity) | M.Tpu835ORF2940P | |
| 2945 | 172 aa hypothetical protein | |||
| 5980 | DUF853 family protein | |||
| 5985 | M | M.Tpu847ORF6885P (100% identity) | TCTAGA | M.Tpu835ORF5985P |
| 5990 | R | Tpu847ORF6885P (100% identity) | TCTAGA | Tpu835ORF5985P |
| 5995 | Sua5/YciO/YrdC/YwlC family protein | |||
| 6245 | hydroxyacid dehydrogenase | |||
| 6250 | RM | Tpu846ORF6580P (64% identity) | Tpu835ORF6250P | |
| 6255 | 336 aa hypothetical protein | |||
| 6655 | 230 aa hypothetical protein | |||
| 6660 | R | Tpu758ORF12955P (99% identity) | Tpu835ORF6660P | |
| 6665 | phosphoribosylamine--glycine ligase | |||
| 10180 | 207 aa hypothetical protein | |||
| 10185 | M | M.Bsp3003ORFAP (54% identity) | M.Tpu835ORF10185P | |
| 10190 | AlwI family type II restriction endonuclease | |||
| 10185 | DNA cytosine methyltransferase | |||
| 10190 | R | Pba12565ORF8745P (94% identity) | Tpu835ORF10195P | |
| 10195 | M | M.FnuFNUORF7350P (95% identity) | M.Tpu835ORF10195P | |
| 10200 | DUF4272 domain-containing protein | |||
| 10480 | ABC transporter ATP-binding protein | |||
| 10485 | M | M.Tpu847ORF11500P (99% identity) | M.Tpu835ORF10485P | |
| 10490 | R | Tpu847ORF11500P (97% identity) | Tpu835ORF10485P | |
| 10495 | response regulator transcription factor | |||
| 11175 | TdeIII family type II restriction endonuclease | |||
| 11180 | M | M.Tpu846ORF12035P (99% identity) | M.Tpu835ORF11180P | |
| 11185 | fructose bisphosphate aldolase | |||
| 11500 | M20/M25/M40 family metallo-hydrolase | |||
| 11505 | M | M.EbaASTBgORFAP (75% identity) | M.Tpu835ORF11505P | |
| 11510 | XRE family transcriptional regulator | |||
| 11515 | R | AmuMucXORF8850P (78% identity) | Tpu835ORF11505P | |
| 11520 | 37 aa hypothetical protein | |||
| 11520 | 37 aa hypothetical protein | |||
| 11525 | M | M.Tpu847ORF12550P (100% identity) | M.Tpu835ORF11525P | |
| 11530 | R | Tpu847ORF12550P (98% identity) | Tpu835ORF11525P | |
| 11535 | 99 aa hypothetical protein | |||
| 12095 | 58 aa hypothetical protein | |||
| 12100 | RM | Tsp806ORF7820P (77% identity) | Tpu835ORF12100P | |
| 12105 | 207 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11105 | bifunctional 4-hydroxy-2-oxoglutarate | |||
| 11110 | R | Tde853McrCP (76% identity) | Tpu835McrCP | |
| 11115 | R | Tde853McrBP (56% identity) | Tpu835McrBP | |
| 11120 | 204 aa hypothetical protein | |||
| 12315 | endonuclease/exonuclease/phosphatase family | |||
| ??? | R | TdeCD1McrBP (77% identity) | Tpu835McrB2P | |
| 12325 | R | Tpu758McrCP (98% identity) | Tpu835McrC2P | |
| 12330 | XRE family transcriptional regulator | |||