Treponema putidum OMZ 847 |
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Putative Treponema putidum OMZ 847 RM systems
Ref: Chan,Y. et al. unpublished
REBASE ref # 34972
Complete sequence: 2,951,713 bp
GenBank #: CP038802
REBASE acronym: Tpu847
Org_num: 60688
All begin E4N76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | GNAT family N-acetyltransferase | |||
| 1690 | R | Tpu846ORF1025P (99% identity) | Tpu847ORF1695P | |
| 1695 | M | M.Tpu846ORF1025P (99% identity) | M.Tpu847ORF1695P | |
| 1700 | cell filamentation protein Fic | |||
| 1705 | S | S1.Tvi862ORF4715P (65% identity) | S1.Tpu847ORF1695P | |
| 1710 | integrase | |||
| 1715 | S | S3.Tpu835ORF1055P (41% identity) | S2.Tpu847ORF1695P | |
| 1720 | S | S2.Tpu846ORF1025P (99% identity) | S3.Tpu847ORF1695P | |
| 1725 | S | S1.Tpu847ORF1695P (36% identity) | S4.Tpu847ORF1695P | |
| 1730 | 118 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | formylglycine-generating enzyme family protein | |||
| 55 | M | M.TdeCD1ORF7005P (88% identity) | M.Tpu847ORF55P | |
| 60 | leucine-rich repeat domain-containing protein | |||
| 300 | 268 aa hypothetical protein | |||
| 305 | M | M.Tpu846ORF9390P (99% identity) | M.Tpu847ORF305P | |
| 310 | 221 aa hypothetical protein | |||
| 365 | 60 aa hypothetical protein | |||
| 370 | M | M.Tpu846ORF9455P (99% identity) | M.Tpu847ORF370P | |
| 375 | 122 aa hypothetical protein | |||
| 380 | 338 aa hypothetical protein | |||
| 385 | DUF5131 family protein | |||
| 390 | 72 aa hypothetical protein | |||
| 395 | 94 aa hypothetical protein | |||
| 400 | single-stranded DNA-binding protein | |||
| 405 | 62 aa hypothetical protein | |||
| 410 | EVE domain-containing protein | |||
| 415 | 149 aa hypothetical protein | |||
| 420 | restriction endonuclease subunit M | |||
| 425 | 208 aa hypothetical protein | |||
| 430 | S | S.PspMn1ORF400P (27% identity) | S.Tpu847ORF370P | |
| 435 | 73 aa hypothetical protein | |||
| 720 | 236 aa hypothetical protein | |||
| 725 | M | M.Tpu846ORF70P (100% identity) | RAATTY | M.Tpu847ORF725P |
| 730 | MFS transporter | |||
| 1540 | N-acetyltransferase | |||
| 1545 | RM | Tpu758ORF6920P (98% identity) | Tpu847ORF1545P | |
| 1550 | YitT family protein | |||
| 3640 | 288 aa hypothetical protein | |||
| 3645 | M | M.Tpu846ORF3240P (100% identity) | M.Tpu847ORF3645P | |
| 3650 | TldD/PmbA family protein | |||
| 4795 | 224 aa hypothetical protein | |||
| 4800 | M | M.Tpu758ORF2735P (95% identity) | M.Tpu847ORF4800P | |
| 4805 | R | Tpu758ORF2735P (95% identity) | Tpu847ORF4800P | |
| 4810 | nucleotidyltransferase | |||
| 6880 | DUF853 family protein | |||
| 6885 | M | M.Tpu835ORF5985P (100% identity) | TCTAGA | M.Tpu847ORF6885P |
| 6890 | R | Tpu846ORF6320P (100% identity) | TCTAGA | Tpu847ORF6885P |
| 6895 | Sua5/YciO/YrdC/YwlC family protein | |||
| 7140 | hydroxyacid dehydrogenase | |||
| 7145 | RM | Tpu846ORF6580P (99% identity) | Tpu847ORF7145P | |
| 7150 | 366 aa hypothetical protein | |||
| 11495 | ABC transporter ATP-binding protein | |||
| 11500 | M | M.Tpu835ORF10485P (99% identity) | M.Tpu847ORF11500P | |
| 11505 | R | Tpu835ORF10485P (97% identity) | Tpu847ORF11500P | |
| 11510 | response regulator transcription factor | |||
| 11860 | ABC transporter ATP-binding protein | |||
| 11865 | V | V.Tpu758ORFBP (100% identity) | V.Tpu847ORF11870P | |
| 11870 | M | M.Tpu758ORFBP (100% identity) | GCSGC | M.Tpu847ORF11870P |
| 11875 | R | Tde854ORF9685P (94% identity) | GCSGC | Tpu847ORF11870P |
| 11880 | H | H.Tpu758ORFBP (100% identity) | H.Tpu847ORF11870P | |
| 11885 | XRE family transcriptional regulator | |||
| 12215 | TdeIII family type II restriction endonuclease | |||
| 12220 | M | M.Tpu835ORF11180P (99% identity) | M.Tpu847ORF12220P | |
| 12225 | fructose bisphosphate aldolase | |||
| 12545 | type II toxin-antitoxin system PemK/MazF family | |||
| 12550 | M | M.Tpu835ORF11525P (100% identity) | M.Tpu847ORF12550P | |
| ??? | R | Tpu835ORF11525P (98% identity) | Tpu847ORF12550P | |
| 12565 | 99 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13355 | endonuclease/exonuclease/phosphatase family | |||
| 13360 | R | Tpu846McrBP (100% identity) | Tpu847McrBP | |
| 13365 | R | TdeSP63McrCP (98% identity) | Tpu847McrCP | |
| 13370 | XRE family transcriptional regulator | |||