Escherichia coli UTI89-2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli UTI89-2 RM systems
Ref: Zulk,J. et al. unpublished
REBASE ref # 34956
Complete sequence: 5,065,747 bp
GenBank #: CP092530
REBASE acronym: Eco892
Org_num: 60636
All begin MKD46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23940 | endoribonuclease SymE | |||
| 23945 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco892ORF23950P |
| 23950 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco892ORF23950P |
| 23955 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco892ORF23950P |
| 23960 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6990 | TrmB family transcriptional regulator | |||
| 6995 | M | M.SboBSORF1444P (100% identity) | A | M.Eco892ORF6995P |
| 7015 | 39 aa hypothetical protein | |||
| 10335 | drug/metabolite exporter YedA | |||
| 10340 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco892DcmP |
| 10345 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco892DcmP |
| 10350 | phosphohydrolase | |||
| 14320 | LexA family transcriptional regulator | |||
| 14325 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco892ORF14325P |
| 14330 | PerC family transcriptional regulator | |||
| 17680 | DNA-binding transcriptional regulator Fis | |||
| 17685 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco892ORF17685P |
| 17690 | DUF2556 family protein | |||
| 18470 | ribulose-phosphate 3-epimerase | |||
| 18475 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco892DamP |
| 18480 | cell division protein DamX | |||
| 23405 | response regulator receiver domain | |||
| 23410 | R | EcosS3ORF15775P (100% identity) | Eco892ORF23415P | |
| 23415 | M | M.EcosS3ORF15775P (100% identity) | M.Eco892ORF23415P | |
| 23420 | conjugal transfer protein TraG N-terminal | |||
| 24180 | PerC family transcriptional regulator | |||
| 24185 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco892ORF24185P |
| 24190 | LexA family transcriptional regulator | |||
| 24220 | 67 aa hypothetical protein | |||
| 24225 | M | M.Ecos142ORF20090P (100% identity) | M.Eco892ORF24225P | |
| 24230 | phage lysis protein EssD | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14125 | DinI-like family protein | |||
| 14130 | R | EspFAAGmrSDP (100% identity) | Eco892GmrSDP | |
| 14135 | recombinase family protein | |||
| 23955 | type I restriction-modification system | |||
| 23960 | R | EcosS1MrrP (100% identity) | Eco892MrrP | |
| 23965 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6120 | recombination protein NinB | |||
| 6125 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco892ORF6125P |
| 6130 | NinE family protein | |||