Escherichia coli TUM2809 |
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Putative Escherichia coli TUM2809 RM systems
Ref: Ikegaya,K. et al. unpublished
REBASE ref # 34910
| Sequence length: | GenBank #: | |
| Chromosome: | 4,824,641 bp | AP026479 |
| plasmid pMTY2809_IncF: | 117,889 bp | AP026480 |
| plasmid pMTY2809_IncN: | 50,698 bp | AP026481 |
REBASE acronym: EcoM2809
Org_num: 60407
All begin TUM2809_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30800 | endoribonuclease SymE | |||
| 30810 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoM2809ORF30830P |
| 30820 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoM2809ORF30830P |
| 30830 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoM2809ORF30830P |
| 30840 | 388 aa hypothetical protein | |||
| 34290 | 156 aa hypothetical protein | |||
| 34300 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoM2809ORF34310P |
| 34310 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoM2809ORF34310P |
| 34320 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoM2809ORF34310P |
| 34330 | 260 aa hypothetical protein | |||
| plasmid pMTY2809_IncF | ||||
| 46140 | repressor TnpA | |||
| 46150 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoM2809ORF46170P |
| 46160 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S1.EcoM2809ORF46170P |
| 46170 | M | M.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | M.EcoM2809ORF46170P |
| 46180 | 73 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6590 | inner membrane transporter YedA | |||
| 6600 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoM2809DcmP |
| 6610 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoM2809DcmP |
| 6620 | phosphohydrolase | |||
| 19060 | DNA-binding protein Fis | |||
| 19070 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoM2809ORF19070P |
| 19080 | acrEF/envCD operon transcriptional regulator | |||
| 20190 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoM2809DamP |
| 20210 | cell division protein DamX | |||
| 30060 | 140 aa hypothetical protein | |||
| 30070 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoM2809ORF30070P |
| 30080 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoM2809ORF30070P |
| 30090 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoM2809ORF30070P |
| 30100 | mcrBC 5-methylcytosine restriction system | |||
| 40970 | 71 aa hypothetical protein | |||
| 40980 | M | M.KpnYN1ORFGP (89% identity) | M.EcoM2809ORF40980P | |
| 40990 | 118 aa hypothetical protein | |||
| 44830 | 65 aa hypothetical protein | |||
| 44840 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoM2809ORF44840P |
| 44850 | anti-adapter protein IraM | |||
| plasmid pMTY2809_IncN | ||||
| 46410 | IS6 family transposase | |||
| 46420 | R | YpsR1ORFAP (99% identity) | CCWGG | EcoM2809ORF46430P |
| 46430 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoM2809ORF46430P |
| 46440 | 88 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30090 | 579 aa hypothetical protein | |||
| 30100 | R | EcosS9McrCP (100% identity) | EcoM2809McrCP | |
| 30110 | R | EcosS3McrBP (100% identity) | EcoM2809McrBP | |
| 30120 | transposase | |||
| 30830 | DNA methyltransferase | |||
| 30840 | R | Ecou021MrrP (100% identity) | EcoM2809MrrP | |
| 30850 | membrane protein | |||