Salmonella enterica SC2016290 |
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Putative Salmonella enterica SC2016290 RM systems
Ref: Peng,K. et al. unpublished
REBASE ref # 34931
| Sequence length: | GenBank #: | |
| Chromosome: | 4,999,786 bp | CP101379 |
| plasmid pSC2016090-mcr-147k: | 147,496 bp | CP101380 |
REBASE acronym: Sen16290
Org_num: 60484
All begin NMU35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20350 | restriction endonuclease | |||
| 20355 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen16290ORF20360P |
| 20360 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen16290ORF20360P |
| 20365 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen16290ORF20360P |
| 20370 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen16290DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen16290ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 domain-containing protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen16290ORF3235P |
| 3240 | replication endonuclease | |||
| 5635 | IS6-like element IS26 family transposase | |||
| 5640 | M | M.StyCORF187P (49% identity) | M.Sen16290ORF5640P | |
| 5645 | thermonuclease family protein | |||
| 9590 | PerC family transcriptional regulator | |||
| 9595 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen16290ORF9595P |
| 9600 | RusA family crossover junction | |||
| 9845 | phosphohydrolase | |||
| 9850 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen16290DcmP |
| 9855 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen16290DcmP |
| 9860 | drug/metabolite exporter YedA | |||
| 20510 | BREX system P-loop protein BrxC | |||
| 20515 | RM | StyUK1IV (100% identity) | GATCAG | Sen16290ORF20515P |
| 20520 | AAA family ATPase | |||
| 22430 | LexA family transcriptional regulator | |||
| 22435 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen16290ORF22435P |
| 22440 | PerC family transcriptional regulator | |||
| plasmid pSC2016090-mcr-147k | ||||
| 25075 | recombinase family protein | |||
| 25080 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen16290ORF25085P |
| 25085 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen16290ORF25085P |
| 25090 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18045 | small effector SsaA | |||
| 18050 | R | StyUK1IP (99% identity) | CAGAG | Sen16290ORF18055P |
| 18055 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen16290ORF18055P |
| 18060 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20345 | BrnT family toxin | |||
| 20350 | R | StyUK1MrrP (100% identity) | Sen16290MrrP | |
| 20355 | type I restriction-modification system | |||