Salmonella enterica SC2016090 |
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Putative Salmonella enterica SC2016090 RM systems
Ref: Peng,K. et al. unpublished
REBASE ref # 34931
Complete sequence: 5,247,576 bp
GenBank #: CP101375
REBASE acronym: Sen16090
Org_num: 60482
All begin NMU33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23530 | restriction endonuclease | |||
| 23535 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen16090ORF23540P |
| 23540 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen16090ORF23540P |
| 23545 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen16090ORF23540P |
| 23550 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | thermonuclease family protein | |||
| 1910 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen16090ORF1910P |
| 1915 | 55 aa hypothetical protein | |||
| 2480 | 277 aa hypothetical protein | |||
| 2485 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen16090ORF2485P |
| 2490 | DNA-binding protein | |||
| 2600 | 202 aa hypothetical protein | |||
| 2605 | M | M.YpsF1ORFBP (100% identity) | M.Sen16090ORF2605P | |
| 2610 | 48 aa hypothetical protein | |||
| 5160 | DUF2556 family protein | |||
| 5165 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen16090ORF5165P |
| 5170 | DNA-binding transcriptional regulator Fis | |||
| 6080 | DUF2732 domain-containing protein | |||
| 6085 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen16090ORF6085P |
| 6090 | replication endonuclease | |||
| 9060 | thermonuclease family protein | |||
| 9065 | M | M.StyCORF187P (49% identity) | M.Sen16090ORF9065P | |
| 9070 | IS6-like element IS26 family transposase | |||
| 9465 | ead/Ea22-like family protein | |||
| 9470 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen16090ORF9470P |
| 9475 | DUF551 domain-containing protein | |||
| 12805 | PerC family transcriptional regulator | |||
| 12810 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen16090ORF12810P |
| 12815 | RusA family crossover junction | |||
| 13060 | phosphohydrolase | |||
| 13065 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen16090DcmP |
| 13070 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen16090DcmP |
| 13075 | drug/metabolite exporter YedA | |||
| 23690 | BREX system P-loop protein BrxC | |||
| 23695 | RM | StyUK1IV (100% identity) | GATCAG | Sen16090ORF23695P |
| 23700 | AAA family ATPase | |||
| 25190 | LexA family transcriptional regulator | |||
| 25195 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen16090ORF25195P |
| 25200 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21220 | small effector SsaA | |||
| 21225 | R | StyUK1IP (99% identity) | CAGAG | Sen16090ORF21230P |
| 21230 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen16090ORF21230P |
| 21235 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23525 | BrnT family toxin | |||
| 23530 | R | StyUK1MrrP (100% identity) | Sen16090MrrP | |
| 23535 | type I restriction-modification system | |||