Rhodococcus species GA1 |
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Putative Rhodococcus species GA1 RM systems
Ref: Jiang,W. unpublished
REBASE ref # 31158
| Sequence length: | GenBank #: | |
| Chromosome: | 5,007,152 bp | CP097186 |
| plasmid pGA1: | 167,169 bp | CP097187 |
| plasmid pGA2: | 80,288 bp | CP097188 |
REBASE acronym: RspGA1
Org_num: 60474
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pGA1 | ||||
| ??? | R | Rru4ORFHP (93% identity) | RspGA1ORFBP | |
| ??? | S | S.RpyAK37ORF16315P (46% identity) | S.RspGA1ORFBP | |
| ??? | M | M.RruP25ORFHP (94% identity) | M.RspGA1ORFBP | |
| ??? | M | M.RspR04ORFIP (89% identity) | M.RspGA1ORFFP | |
| ??? | S | S.Mgo9456ORF3300P (27% identity) | S1.RspGA1ORFFP | |
| ??? | S | S1.MspNJES13ORFBP (45% identity) | S2.RspGA1ORFFP | |
| ??? | R | RspR04ORFIP (96% identity) | RspGA1ORFFP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | RM | RruR1ORF7960P (56% identity) | RspGA1ORFCP | |
| ??? | M | M.RspPD04ORF1350P (98% identity) | CTCGAG | M.RspGA1ORFGP |
| ??? | V | V.RspPD04ORF1350P (61% identity) | V.RspGA1ORFGP | |
| plasmid pGA1 | ||||
| ??? | RM | Ssp693ORF25520P (65% identity) | RspGA1ORFEP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pGA2 | ||||
| ??? | M | M.RrhTRN7ORFCP (92% identity) | M.RspGA1ORFDP | |
| ??? | R | RruYT1ORF20020P (97% identity) | RspGA1ORFDP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | RruR1McrBP (61% identity) | RspGA1McrB2P | |
| ??? | R | RruR1McrCP (92% identity) | RspGA1McrC2P | |
| ??? | R | Rsp2GMrrP (100% identity) | RspGA1MrrP | |
| ??? | R | RspPD04McrBP (99% identity) | RspGA1McrBP | |
| ??? | R | RrhGD02McrCP (98% identity) | RspGA1McrCP | |
| ??? | R | Rsp185MrrP (58% identity) | RspGA1Mrr2P | |