Pseudomonas aeruginosa PA-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa PA-1 RM systems
Ref: Wozniak,A. and Brito,B. unpublished
REBASE ref # 34925
| Sequence length: | GenBank #: | |
| Chromosome: | 7,046,937 bp | CP097709 |
| plasmid pPA-1: | 54,029 bp | CP097845 |
REBASE acronym: PaesPA1
Org_num: 60463
All begin M8341_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 25 | M | M.PaesPA2ORF25P (100% identity) | M.PaesPA1ORF25P | |
| 30 | S | S.PaesPA2ORF25P (98% identity) | S.PaesPA1ORF25P | |
| 35 | IS30-like element IS1394 family transposase | |||
| ??? | 465 aa hypothetical protein SRABI66_04297 | |||
| 40 | restriction endonuclease subunit S | |||
| 45 | OST-HTH/LOTUS domain-containing protein | |||
| 50 | R | PaesPA2ORF25P (100% identity) | PaesPA1ORF25P | |
| 55 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5545 | Com family DNA-binding transcriptional | |||
| 5550 | M | M.PaesPA2ORF5550P (100% identity) | M.PaesPA1ORF5550P | |
| 5555 | TetR/AcrR family transcriptional regulator | |||
| 14515 | 185 aa hypothetical protein | |||
| 14520 | M | M.PaesPA2ORF14530P (100% identity) | M.PaesPA1ORF14520P | |
| 14525 | DNA topoisomerase III | |||
| 14675 | 142 aa hypothetical protein | |||
| 14680 | M | M.PaesPA2ORF14690P (100% identity) | M.PaesPA1ORF14680P | |
| 14685 | 108 aa hypothetical protein | |||
| 18765 | DEAD/DEAH box helicase | |||
| 18770 | RM | PaesPA2ORF18780P (100% identity) | PaesPA1ORF18770P | |
| 18775 | chromosome partitioning protein ParA | |||
| plasmid pPA-1 | ||||
| 33345 | 82 aa hypothetical protein | |||
| 33350 | R | PaesPA2ORF33320P (100% identity) | CTGCAG | PaesPA1ORF33355P |
| 33355 | M | M.PaesPA2ORF33320P (100% identity) | M.PaesPA1ORF33355P | |
| 33360 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25710 | VWA domain-containing protein | |||
| 25715 | R | SspSKA14ORFFP (100% identity) | PaesPA1ORF25720P | |
| 25720 | M | M.Ppu495ORF21255P (100% identity) | M.PaesPA1ORF25720P | |
| 25725 | DUF4391 domain-containing protein | |||