Vibrio crassostreae LMG 22240 |
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Putative Vibrio crassostreae LMG 22240 RM systems
Ref: Jiang,C. et al. Curr Microbiol 79 (1), 10 (2021)
REBASE ref # 34867
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,475,743 bp | AP025476 |
| chromosome 2: | 1,947,964 bp | AP025477 |
| plasmid p1: | 237,546 bp | AP025478 |
REBASE acronym: Vcr22240
Org_num: 60541
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | C | C.Vhaf4ORFEP (93% identity) | C.Vcr22240ORFDP | |
| ??? | R | VbaORF1910P (97% identity) | Vcr22240ORFDP | |
| ??? | M | M.VbaORF1910P (98% identity) | M.Vcr22240ORFDP | |
| ??? | S | S.Vvu36I (59% identity) | S.Vcr22240ORFDP | |
| plasmid p1 | ||||
| ??? | M | M.VcrJ55ORF1330002P (100% identity) | M.Vcr22240ORFHP | |
| ??? | S | S.VcrJ55ORF1330002P (100% identity) | S.Vcr22240ORFHP | |
| ??? | R | VcrJ55ORF1330002P (100% identity) | Vcr22240ORFHP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.VcrJ55ORF1560012P (100% identity) | CAGCTG | M.Vcr22240ORFGP |
| ??? | R | VcrJ55ORF1560012P (100% identity) | CAGCTG | Vcr22240ORFGP |
| ??? | RM | ValYM4ORF5790P (84% identity) | Vcr22240ORFFP | |
| ??? | M | M.PspGJ3ORF2680P (83% identity) | M.Vcr22240ORFCP | |
| ??? | M | M.Pda9631ORF12185P (94% identity) | M.Vcr22240ORFBP | |
| ??? | R | Pda9631ORF12185P (96% identity) | Vcr22240ORFBP | |
| chromosome 2 | ||||
| ??? | R | Vsp398DptFP (98% identity) | Vcr22240DptFP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptF | |||
| ??? | R | Vta267DptGP (98% identity) | Vcr22240DptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | R | Vta267DptHP (74% identity) | Vcr22240DptHP | |
| ??? | DNA sulfur modification protein DndE | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | M | M.Vsp398DndEP (95% identity) | M.Vcr22240DndEP | |
| ??? | DNA sulfur modification protein DndD | |||
| ??? | DNA sulfur modification protein DndE | |||
| ??? | M | M.Vgi001DndDP (98% identity) | M.Vcr22240DndDP | |
| ??? | DNA phosphorothioation system sulfurtransferase DndC | |||
| ??? | DNA sulfur modification protein DndD | |||
| ??? | M | M.Vta267DndCP (100% identity) | M.Vcr22240DndCP | |
| ??? | DNA sulfur modification protein DndB | |||
| ??? | DNA phosphorothioation system sulfurtransferase DndC | |||
| ??? | M | M.Vsp398DndBP (99% identity) | M.Vcr22240DndBP | |
| ??? | M | M.VcrJ55ORF750066P (100% identity) | M.Vcr22240ORFEP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| ??? | R | VspFE10ORFEP (97% identity) | Vcr22240ORFIP | |