Fusobacterium nucleatum subsp. polymorphum SSMR1 |
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Putative Fusobacterium nucleatum subsp. polymorphum SSMR1 RM systems
Ref: Ramakrishnan,S.A. and Kalajirao,S. unpublished
REBASE ref # 34817
Complete sequence: 2,443,126 bp
GenBank #: CP100429
REBASE acronym: FnuSSMR1
Org_num: 60111
All begin NLJ26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7885 | ATP-binding protein | |||
| 7890 | R | Fpo10562ORF3030P (99% identity) | FnuSSMR1ORF7925P | |
| 7895 | tyrosine-type recombinase/integrase | |||
| 7900 | S | S3.FnuSP11ORF6740P (42% identity) | S3.FnuSSMR1ORF7925P | |
| 7905 | transposase | |||
| 7910 | 75 aa hypothetical protein | |||
| 7915 | S | S1.Fnu10562VP (100% identity) | S2.FnuSSMR1ORF7925P | |
| 7920 | S | S2.Fnu10562V (100% identity) | CTANNNNNNNNTCC | S1.FnuSSMR1ORF7925P |
| 7925 | M | M.Fpo10562ORF3030P (100% identity) | M.FnuSSMR1ORF7925P | |
| 7930 | metal ABC transporter permease | |||
| 10470 | SPFH domain-containing protein | |||
| 10475 | R | Fpo10562ORF5585P (100% identity) | FnuSSMR1ORF10495P | |
| 10480 | S | S2.Fpo10562ORF5585P (99% identity) | CAYNNNNNNCTC | S2.FnuSSMR1ORF10495P |
| 10485 | S | S1.Fpo10562ORF5585P (98% identity) | CTANNNNNNNNTYTC | S1.FnuSSMR1ORF10495P |
| 10490 | DNA binding domain-containing protein | |||
| 10495 | M | M.Fpo10562ORF5585P (100% identity) | M.FnuSSMR1ORF10495P | |
| 10500 | 107 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1305 | cob(I)yrinic acid a,c-diamide | |||
| 1310 | M | M.Fpo10562ORF8350P (100% identity) | M.FnuSSMR1ORF1310P | |
| 1315 | R | Fpo10562ORF8350P (83% identity) | FnuSSMR1ORF1310P | |
| 1320 | MATE family efflux transporter | |||
| 9240 | glutamine--fructose-6-phosphate transaminase | |||
| 9245 | M | M.Fpo10562ORF4345P (100% identity) | ATGCAT | M.FnuSSMR1ORF9245P |
| 9250 | restriction endonuclease | |||
| 9245 | adenine-specific DNA-methyltransferase | |||
| 9250 | R | Fpo10562ORF4350P (100% identity) | ATGCAT | FnuSSMR1ORF9250P |
| 9255 | 486 aa hypothetical protein | |||
| 11160 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 11165 | M | M.Fpo43A3ORF9130P (100% identity) | GCATC | M.FnuSSMR1ORF11165P |
| 11170 | ArsB/NhaD family transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 775 | DEAD/DEAH box helicase | |||
| 780 | R | Fpo10562ORF7820P (100% identity) | FnuSSMR1ORF780P | |
| 785 | RidA family protein | |||