Treponema denticola CD-1 |
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Putative Treponema denticola CD-1 RM systems
Ref: Zeng,H. et al. unpublished
REBASE ref # 32485
Complete sequence: 2,892,458 bp
GenBank #: CP051304
REBASE acronym: TdeCD1
Org_num: 60316
All begin E4N79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 205 | 62 aa hypothetical protein | |||
| 210 | R | TspB152ORF210P (98% identity) | TdeCD1ORF215P | |
| 215 | M | M.Tde898ORF260P (100% identity) | M.TdeCD1ORF215P | |
| 220 | Fic family protein | |||
| 225 | S | S1.Tsp788ORF235P (80% identity) | S1.TdeCD1ORF215P | |
| 230 | tyrosine-type recombinase/integrase | |||
| 235 | S | S2.TspB152ORF210P (98% identity) | S2.TdeCD1ORF215P | |
| 240 | S | S3.TdeSP63IP (99% identity) | S3.TdeCD1ORF215P | |
| 245 | EamA family transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7000 | 178 aa hypothetical protein | |||
| 7005 | M | M.TdeSS8ORF9885P (96% identity) | M.TdeCD1ORF7005P | |
| 7010 | 386 aa hypothetical protein | |||
| 9930 | MFS transporter | |||
| 9935 | M | M.Tde852ORF10390P (99% identity) | RAATTY | M.TdeCD1ORF9935P |
| 9940 | paraslipin | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7245 | TIGR01440 family protein | |||
| 7250 | R | TspB152ORF6865P (99% identity) | TdeCD1ORF7255P | |
| 7255 | M | M.TspB152ORF6865P (100% identity) | M.TdeCD1ORF7255P | |
| 7260 | helix-turn-helix transcriptional regulator | |||
| 13040 | S9 family peptidase | |||
| 13045 | M | M.TdeSS8II (96% identity) | CTAAT | M.TdeCD1ORF13045P |
| 13050 | DUF3298 and DUF4163 domain-containing protein | |||