Treponema species OMZ 787 |
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Putative Treponema species OMZ 787 RM systems
Ref: Zeng,H. et al. unpublished
REBASE ref # 32485
Complete sequence: 2,756,918 bp
GenBank #: CP051198
REBASE acronym: Tsp787
Org_num: 60330
All begin E4O05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1000 | GGDEF domain-containing protein | |||
| 1005 | M | M.Tde854ORF11920P (95% identity) | M.Tsp787ORF1005P | |
| 1010 | virulence RhuM family protein | |||
| 1015 | S | S.Tde700771ORF11320P (59% identity) | S1.Tsp787ORF1005P | |
| 1020 | S | S2.Tde823ORF11440P (85% identity) | S2.Tsp787ORF1005P | |
| 1025 | R | TdeH22IVP (93% identity) | Tsp787ORF1005P | |
| 1030 | Type 1 glutamine amidotransferase-like | |||
| 1350 | sigma-70 family RNA polymerase sigma factor | |||
| 1355 | M | M.Fsp8396ORF72P (49% identity) | M.Tsp787ORF1355P | |
| 1360 | 321 aa hypothetical protein | |||
| 12485 | EamA family transporter | |||
| 12490 | S | S1.Tsp799ORF13765P (35% identity) | S3.Tsp787ORF12515P | |
| 12495 | tyrosine-type recombinase/integrase | |||
| 12500 | S | S2.Tsp788ORF235P (100% identity) | S2.Tsp787ORF12515P | |
| 12505 | S | S1.TspB152ORF210P (95% identity) | CRAANNNNNNNNTDCC | S1.Tsp787ORF12515P |
| 12510 | Fic family protein | |||
| 12515 | M | M.Tsp799ORF13765P (100% identity) | M.Tsp787ORF12515P | |
| 12520 | R | Tsp799ORF13765P (99% identity) | Tsp787ORF12515P | |
| 12525 | GNAT family N-acetyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 800 | fructose bisphosphate aldolase | |||
| 805 | M | M.Tpu847ORF12220P (96% identity) | M.Tsp787ORF805P | |
| 810 | TdeIII family type II restriction endonuclease | |||
| 1580 | 131 aa hypothetical protein | |||
| 1585 | M | M.Tpu847ORF12550P (56% identity) | M.Tsp787ORF1585P | |
| 1590 | 99 aa hypothetical protein | |||
| 3315 | lipoate--protein ligase | |||
| 3320 | R | Tpu847ORF11500P (94% identity) | Tsp787ORF3325P | |
| 3325 | M | M.Tpu835ORF10485P (85% identity) | M.Tsp787ORF3325P | |
| 3330 | ABC transporter ATP-binding protein | |||
| 3365 | oligoendopeptidase F | |||
| 3370 | M | M.Tsp788ORF10195P (99% identity) | M.Tsp787ORF3370P | |
| 3375 | MFS transporter | |||
| 6050 | 127 aa hypothetical protein | |||
| 6055 | R | Tsp788ORF7365P (98% identity) | Tsp787ORF6055P | |
| 6060 | 223 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2375 | S9 family peptidase | |||
| 2380 | M | M.Tsp788ORF11175P (98% identity) | M.Tsp787ORF2380P | |
| 2385 | DUF3298 and DUF4163 domain-containing protein | |||
| 7705 | 364 aa hypothetical protein | |||
| 7710 | R | Tsp788ORF5615P (87% identity) | Tsp787ORF7715P | |
| 7715 | M | M.LweRT1ORF018145P (12% identity) | M.Tsp787ORF7715P | |
| 7720 | dihydrolipoyl dehydrogenase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80 | HIT family protein | |||
| ??? | R | Tsp788McrBP (79% identity) | Tsp787McrBP | |
| 90 | R | Tsp788McrCP (94% identity) | Tsp787McrCP | |
| 95 | 244 aa hypothetical protein | |||