Deinococcus radiodurans BRD125 |
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Putative Deinococcus radiodurans BRD125 RM systems
Ref: Ji,H.J. and Seo,H.S. unpublished
REBASE ref # 34829
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,647,192 bp | CP094462 |
| chromosome 2: | 411,670 bp | CP094463 |
| plasmid p1_BRD125: | 177,301 bp | CP094464 |
| plasmid p2_BRD125: | 45,485 bp | CP094465 |
REBASE acronym: Dra125
Org_num: 60068
All begin MSS93_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 940 | transcription-repair coupling factor | |||
| 945 | R | Rsp52915ORF905P (55% identity) | Dra125ORF945P | |
| 950 | GNAT family N-acetyltransferase | |||
| 4935 | APC family permease | |||
| 4940 | RM | DraRI (22% identity) | Dra125ORF4940BP | |
| 4945 | RM | DraRI (56% identity) | Dra125ORF4940AP | |
| 4950 | aminotransferase class I/II-fold pyridoxal | |||
| 9825 | DNA polymerase III subunit alpha | |||
| 9830 | R | DraRMrr2P (94% identity) | Dra125Mrr2P | |
| 9835 | 202 aa hypothetical protein | |||
| chromosome 2 | ||||
| 16330 | 79 aa hypothetical protein | |||
| 16335 | RM | DraRORF119P (62% identity) | Dra125ORF16335BP | |
| 16340 | RM | DraRORF119P (24% identity) | Dra125ORF16335AP | |
| 16345 | 109 aa hypothetical protein | |||
| plasmid p1_BRD125 | ||||
| 17045 | 297 aa hypothetical protein | |||
| ??? | RM | Dra54ORF15790P (84% identity) | Dra125ORF17050P | |
| 17060 | IS630-like element ISDra3 family transposase | |||
| plasmid p2_BRD125 | ||||
| 17535 | 330 aa hypothetical protein | |||
| 17540 | M | M.DraRORFC20P (100% identity) | M.Dra125ORF17540P | |
| 17545 | IS4 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10320 | ATP-dependent Clp protease adapter ClpS | |||
| 10325 | R | DraRMrrP (100% identity) | Dra125MrrP | |
| 10330 | ATP-dependent Clp protease ATP-binding subunit | |||