Salmonella enterica subsp. enterica serovar Gallinarum SCPM-O-B-4548 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Gallinarum SCPM-O-B-4548 RM systems
Ref: Bogun,A. et al. unpublished
REBASE ref # 33275
Complete sequence: 4,664,130 bp
GenBank #: CP088142
REBASE acronym: Sen4548
Org_num: 58843
All begin LRM93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19310 | restriction endonuclease | |||
| 19315 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen4548ORF19315P |
| 19320 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen4548ORF19315P |
| 19325 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen4548ORF19315P |
| 19330 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen4548DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4548ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 5460 | DUF3850 domain-containing protein | |||
| 5465 | M | M.SenC618ORF1130P (100% identity) | GATC | M.Sen4548ORF5465P |
| 5470 | replication endonuclease | |||
| 13685 | drug/metabolite exporter YedA | |||
| 13690 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen4548DcmP |
| 13695 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen4548DcmP |
| 13700 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17220 | small effector SsaA | |||
| 17225 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Sen4548ORF17230P |
| 17230 | M | M.SenC618I (100% identity) | CAGAG | M.Sen4548ORF17230P |
| 17235 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19305 | SAM-dependent methyltransferase | |||
| 19310 | R | Ssp3CMrrP (100% identity) | Sen4548MrrP | |
| 19315 | type I restriction-modification system subunit | |||