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Putative Enterobacter cloacae isolate 114 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
Sequence length: | GenBank #: | |
chromosome main: | 4,788,084 bp | OW967388 |
chromosome main: | 4,793,544 bp | OW968296 |
chromosome main: | 4,797,313 bp | OW849483 |
chromosome main: | 4,801,035 bp | OW969670 |
chromosome main: | 4,766,042 bp | OW969715 |
plasmid P1: | 213,001 bp | OW967389 |
plasmid P1: | 297,896 bp | OW968297 |
plasmid P1: | 305,034 bp | OW849484 |
plasmid P1: | 306,668 bp | OW969716 |
REBASE acronym: Ecl114
Org_num: 58436
All begin AI2624V1_, AI2759V1_, AI2759V1_REPA, AI2915V1_, AI2924V1_, AI2924V1_REPA, AI2972V1_, AI2972V1_REPA
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome main | ||||
502 | 867 aa hypothetical protein | |||
503 | RM | Esp193ORF935BP (100% identity) | AGGAAG | RM1.Ecl114aORF503P |
504 | 1000 aa hypothetical protein | |||
505 | 174 aa hypothetical protein | |||
506 | RM | Esp193ORF935AP (100% identity) | AGGAAG | RM2.Ecl114aORF503P |
507 | 584 aa hypothetical protein | |||
536 | 335 aa hypothetical protein | |||
??? | R | EspMGH3ORFDP (100% identity) | Ecl114aORF537P | |
540 | Endoribonuclease SymE | |||
980 | DNA base-flipping protein | |||
981 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114aORF981P |
982 | 83 aa hypothetical protein | |||
2796 | inner membrane transporter YedA | |||
2797 | V | V.Esp193DcmP (100% identity) | V.Ecl114aDcmP | |
2798 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114aDcmP |
2799 | 233 aa hypothetical protein | |||
chromosome main | ||||
502 | 867 aa hypothetical protein | |||
503 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114cORF503BP |
504 | 1000 aa hypothetical protein | |||
505 | 174 aa hypothetical protein | |||
506 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114cORF503AP |
507 | 584 aa hypothetical protein | |||
536 | 335 aa hypothetical protein | |||
??? | R | EspMGH3ORFDP (100% identity) | Ecl114cORF537P | |
540 | Endoribonuclease SymE | |||
974 | DNA base-flipping protein | |||
975 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114cORF975P |
976 | 83 aa hypothetical protein | |||
2669 | 175 aa hypothetical protein | |||
2670 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114cORF2670P | |
2671 | 241 aa hypothetical protein | |||
2853 | inner membrane transporter YedA | |||
2854 | V | V.Esp193DcmP (100% identity) | V.Ecl114cDcmP | |
2855 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114cDcmP |
2856 | 233 aa hypothetical protein | |||
4064 | Ribulose-phosphate 3-epimerase | |||
4065 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114cDamP |
4066 | Cell division protein DamX | |||
chromosome main | ||||
504 | 867 aa hypothetical protein | |||
505 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114ORF505P |
506 | 1000 aa hypothetical protein | |||
507 | 174 aa hypothetical protein | |||
508 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114ORF508P |
509 | 584 aa hypothetical protein | |||
976 | DNA base-flipping protein | |||
977 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114ORF977P |
978 | 83 aa hypothetical protein | |||
2673 | 175 aa hypothetical protein | |||
2674 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114ORF2674P | |
2675 | 241 aa hypothetical protein | |||
2859 | inner membrane transporter YedA | |||
2860 | V | V.Esp193DcmP (100% identity) | V.Ecl114DcmP | |
2861 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114DcmP |
2862 | 233 aa hypothetical protein | |||
4072 | Ribulose-phosphate 3-epimerase | |||
4073 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114DamP |
4074 | Cell division protein DamX | |||
chromosome main | ||||
504 | 867 aa hypothetical protein | |||
505 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114dORF505BP |
506 | 1000 aa hypothetical protein | |||
507 | 174 aa hypothetical protein | |||
508 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114dORF505AP |
509 | 584 aa hypothetical protein | |||
538 | 335 aa hypothetical protein | |||
??? | R | EspMGH3ORFDP (100% identity) | Ecl114dORF539P | |
542 | Endoribonuclease SymE | |||
976 | DNA base-flipping protein | |||
977 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114dORF977P |
978 | 83 aa hypothetical protein | |||
2682 | 175 aa hypothetical protein | |||
2683 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114dORF2683P | |
2684 | 241 aa hypothetical protein | |||
2866 | inner membrane transporter YedA | |||
2867 | V | V.Esp193DcmP (100% identity) | V.Ecl114dDcmP | |
2868 | M | M.ExiPC4LDcmP (98% identity) | CCWGG | M.Ecl114dDcmP |
2869 | 233 aa hypothetical protein | |||
4078 | Ribulose-phosphate 3-epimerase | |||
4079 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114dDamP |
4080 | Cell division protein DamX | |||
chromosome main | ||||
502 | 867 aa hypothetical protein | |||
503 | RM | Esp193ORF935BP (100% identity) | AGGAAG | Ecl114bORF503BP |
504 | 1000 aa hypothetical protein | |||
505 | 174 aa hypothetical protein | |||
506 | RM | Esp193ORF935AP (100% identity) | AGGAAG | Ecl114bORF503AP |
507 | 584 aa hypothetical protein | |||
536 | 335 aa hypothetical protein | |||
??? | R | EspMGH3ORFDP (100% identity) | Ecl114bORF537P | |
540 | Endoribonuclease SymE | |||
974 | DNA base-flipping protein | |||
975 | M | M.EspMGH3ORFKP (99% identity) | CTGCAG | M.Ecl114bORF975P |
976 | 83 aa hypothetical protein | |||
2678 | 175 aa hypothetical protein | |||
2679 | M | M2.Esp193ORF13605P (100% identity) | M.Ecl114bORF2679P | |
2680 | 241 aa hypothetical protein | |||
4034 | Ribulose-phosphate 3-epimerase | |||
4035 | M | M.ExiPC4LDamP (100% identity) | GATC | M.Ecl114bDamP |
4036 | Cell division protein DamX | |||
plasmid P1 | ||||
4650 | 106 aa hypothetical protein | |||
4651 | M | M.Ssp15303ORFDP (100% identity) | M.Ecl114aORF4651P | |
4652 | Polyamine aminopropyltransferase | |||
4677 | 387 aa hypothetical protein | |||
4678 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114aORF4678P | |
4679 | 283 aa hypothetical protein | |||
plasmid P1 | ||||
45 | pseudogene | |||
4608 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl114cORF4608P |
4609 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecl114cORF4608P |
64 | 293 aa hypothetical protein CJD35_20465 | |||
4662 | 55 aa hypothetical protein | |||
4663 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecl114cORF4663P |
4664 | Endonuclease YhcR | |||
4761 | 106 aa hypothetical protein | |||
4762 | M | M.Ssp15303ORFDP (100% identity) | M.Ecl114cORF4762P | |
4763 | Polyamine aminopropyltransferase | |||
4788 | 387 aa hypothetical protein | |||
4789 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114cORF4789P | |
4790 | 283 aa hypothetical protein | |||
plasmid P1 | ||||
84 | 293 aa hypothetical protein CJD35_20465 | |||
4573 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecl114ORF4574P |
4574 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl114ORF4574P |
65 | pseudogene | |||
4679 | 55 aa hypothetical protein | |||
4680 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecl114ORF4680P |
4681 | Endonuclease YhcR | |||
4778 | 106 aa hypothetical protein | |||
4779 | M | M.Ssp15303ORFDP (100% identity) | M.Ecl114ORF4779P | |
4780 | Polyamine aminopropyltransferase | |||
4805 | 387 aa hypothetical protein | |||
4806 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114ORF4806P | |
4807 | 283 aa hypothetical protein | |||
plasmid P1 | ||||
52 | pseudogene | |||
4581 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecl114bORF4581P |
4582 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecl114bORF4581P |
71 | 293 aa hypothetical protein CJD35_20465 | |||
4641 | 55 aa hypothetical protein | |||
4642 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecl114bORF4642P |
4643 | Endonuclease YhcR | |||
4767 | 387 aa hypothetical protein | |||
4768 | M | M.Ssp15303ORFEP (95% identity) | M.Ecl114bORF4768P | |
4769 | 283 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome main | ||||
546 | Melibiose carrier protein | |||
547 | R | EspMGH3McrCP (100% identity) | Ecl114aMcrCP | |
548 | R | EspMGH3McrBP (100% identity) | Ecl114aMcrBP | |
549 | Arylesterase | |||
chromosome main | ||||
548 | Melibiose carrier protein | |||
549 | R | EspMGH3McrCP (100% identity) | Ecl114McrCP | |
550 | R | EspMGH3McrBP (100% identity) | Ecl114McrBP | |
551 | Arylesterase | |||
chromosome main | ||||
546 | Melibiose carrier protein | |||
547 | R | EspMGH3McrCP (100% identity) | Ecl114bMcrCP | |
548 | R | EspMGH3McrBP (100% identity) | Ecl114bMcrBP | |
549 | Arylesterase |