Klebsiella pneumoniae isolate 405 |
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Putative Klebsiella pneumoniae isolate 405 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 5,441,253 bp | OW849405 |
| chromosome main: | 5,451,483 bp | OW848816 |
| chromosome main: | 5,452,120 bp | OW848868 |
| chromosome main: | 5,530,992 bp | OW967765 |
| chromosome main: | 5,403,838 bp | OW967029 |
| chromosome main: | 5,457,247 bp | OW848845 |
| chromosome main: | 5,499,978 bp | OW968283 |
| chromosome main: | 5,536,953 bp | OW848862 |
| chromosome main: | 5,416,465 bp | OW849226 |
| chromosome main: | 5,273,511 bp | OW967381 |
| chromosome main: | 5,481,599 bp | OW849325 |
| chromosome main: | 5,446,955 bp | OW969761 |
| chromosome main: | 5,451,465 bp | OW969870 |
| plasmid P1: | 224,789 bp | OW969871 |
| plasmid P1: | 247,964 bp | OW967030 |
| plasmid P1: | 184,932 bp | OW968284 |
| plasmid P1: | 194,000 bp | OW849227 |
| plasmid P1: | 248,007 bp | OW849326 |
| plasmid P1: | 188,493 bp | OW848817 |
| plasmid P1: | 240,627 bp | OW849406 |
| plasmid P1: | 225,970 bp | OW848846 |
| plasmid P1: | 247,179 bp | OW848863 |
| plasmid P1: | 188,579 bp | OW848869 |
| plasmid P1: | 236,630 bp | OW969762 |
| plasmid P2: | 111,043 bp | OW848818 |
| plasmid P2: | 83,352 bp | OW969763 |
| plasmid P2: | 110,360 bp | OW849327 |
| plasmid P2: | 190,092 bp | OW967031 |
| plasmid P2: | 96,511 bp | OW967383 |
| plasmid P2: | 111,043 bp | OW848870 |
REBASE acronym: Kpni405b
Org_num: 58723
All begin AI2585V1_, AI2585V1_REPA, AI2592V1_, AI2592V1_REPA, AI2595V1_, AI2595V1_REPA, AI2600V1_, AI2600V1_REPA, AI2621V1_, AI2622V1_, AI2622V1_REPA, AI2670V1_, AI2670V1_REPA, AI2677V1_, AI2677V1_REPA, AI2800V1_, AI2800V1_REPA, AI2862V1_, AI2862V1_REPA, AI2921V1_, AI2921V1_REPA, AI2967V1_, AI2967V1_REPA, AN2343V1_, AN2343V1_REPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid P2 | ||||
| 5382 | 621 aa hypothetical protein | |||
| 5383 | M | M.Kqu610ORF27150P (100% identity) | M.Kpni405hORF5383P | |
| 5384 | S | S.Kqu610ORF27150P (100% identity) | S.Kpni405hORF5383P | |
| 5385 | R | Kqu610ORF27150P (100% identity) | Kpni405hORF5383P | |
| 5386 | 71 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5297 | 621 aa hypothetical protein | |||
| 5298 | M | M.Kpni405ORF5302P (100% identity) | GAGNNNNNNTAYG | M.Kpni405aORF5298P |
| 5299 | S | S.Kpni405ORF5302P (100% identity) | GAGNNNNNNTAYG | S.Kpni405aORF5298P |
| 5300 | R | Kpni405ORF5302P (100% identity) | GAGNNNNNNTAYG | Kpni405aORF5298P |
| 5301 | 71 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5301 | 621 aa hypothetical protein | |||
| 5302 | M | M.Kpni405aORF5298P (100% identity) | GAGNNNNNNTAYG | M.Kpni405ORF5302P |
| 5303 | S | S.Kpni405aORF5298P (100% identity) | GAGNNNNNNTAYG | S.Kpni405ORF5302P |
| 5304 | R | Kpni405aORF5298P (100% identity) | GAGNNNNNNTAYG | Kpni405ORF5302P |
| 5305 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 355 | Cell division protein DamX | |||
| 356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405dDamP |
| 357 | Ribulose-phosphate 3-epimerase | |||
| 3794 | 192 aa hypothetical protein | |||
| 3795 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405dORF3795P | |
| 3796 | 101 aa hypothetical protein | |||
| 4440 | Beta-xylosidase | |||
| 4441 | R | Kpni405jORF4407P (100% identity) | Kpni405dORF4441P | |
| 4442 | 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin | |||
| chromosome main | ||||
| 356 | Cell division protein DamX | |||
| 357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405aDamP |
| 358 | Ribulose-phosphate 3-epimerase | |||
| 1798 | 235 aa hypothetical protein | |||
| 1799 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405aDcmP |
| 1800 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405aDcmP | |
| 1801 | inner membrane transporter YedA | |||
| 3793 | 192 aa hypothetical protein | |||
| 3794 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405aORF3794P | |
| 3795 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 356 | Cell division protein DamX | |||
| 357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405DamP |
| 358 | Ribulose-phosphate 3-epimerase | |||
| 1801 | 235 aa hypothetical protein | |||
| 1802 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405DcmP |
| 1803 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405DcmP | |
| 1804 | inner membrane transporter YedA | |||
| 3796 | 192 aa hypothetical protein | |||
| 3797 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405ORF3797P | |
| 3798 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 134 | IS1 family transposase | |||
| 192 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405bORF192P |
| 193 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405bORF192P |
| 147 | 293 aa hypothetical protein CJD35_20465 | |||
| 417 | Cell division protein DamX | |||
| 418 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405bDamP |
| 419 | Ribulose-phosphate 3-epimerase | |||
| 1745 | 235 aa hypothetical protein | |||
| 1746 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405bDcmP |
| 1747 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405bDcmP | |
| 1748 | inner membrane transporter YedA | |||
| 148 | 293 aa hypothetical protein CJD35_20465 | |||
| 2557 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405bORF2558P |
| 2558 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405bORF2558P |
| 135 | IS1 family transposase | |||
| 3725 | 192 aa hypothetical protein | |||
| 3726 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405bORF3726P | |
| 3727 | 101 aa hypothetical protein | |||
| 136 | IS1 family transposase | |||
| 4078 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405bORF4078P |
| 4079 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405bORF4078P |
| 149 | 293 aa hypothetical protein CJD35_20465 | |||
| chromosome main | ||||
| 356 | Cell division protein DamX | |||
| 357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405cDamP |
| 358 | Ribulose-phosphate 3-epimerase | |||
| 1736 | 235 aa hypothetical protein | |||
| 1737 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405cDcmP |
| 1738 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405cDcmP | |
| 1739 | inner membrane transporter YedA | |||
| 3755 | 192 aa hypothetical protein | |||
| 3756 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405cORF3756P | |
| 3757 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 355 | Cell division protein DamX | |||
| 356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405gDamP |
| 357 | Ribulose-phosphate 3-epimerase | |||
| 1787 | 235 aa hypothetical protein | |||
| 1788 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405gDcmP |
| 1789 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405gDcmP | |
| 1790 | inner membrane transporter YedA | |||
| 3826 | 192 aa hypothetical protein | |||
| 3827 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405gORF3827P | |
| 3828 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 369 | Cell division protein DamX | |||
| 370 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn405kDamP |
| 371 | Ribulose-phosphate 3-epimerase | |||
| 1805 | 235 aa hypothetical protein | |||
| 1806 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn405kDcmP |
| 1807 | V | V.Kpni405jDcmP (100% identity) | V.Kpn405kDcmP | |
| 1808 | inner membrane transporter YedA | |||
| 3868 | 192 aa hypothetical protein | |||
| 3869 | M | M.Kpni405jORF3760P (100% identity) | M.Kpn405kORF3869P | |
| 3870 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 356 | Cell division protein DamX | |||
| 357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405eDamP |
| 358 | Ribulose-phosphate 3-epimerase | |||
| 1409 | 322 aa hypothetical protein | |||
| 1410 | M | M.KpnyORFDP (98% identity) | M.Kpni405eORF1410P | |
| 1411 | Crossover junction endodeoxyribonuclease RusA | |||
| 1843 | 235 aa hypothetical protein | |||
| 1844 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405eDcmP |
| 1845 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405eDcmP | |
| 1846 | inner membrane transporter YedA | |||
| 3909 | 192 aa hypothetical protein | |||
| 3910 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405eORF3910P | |
| 3911 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 355 | Cell division protein DamX | |||
| 356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405jDamP |
| 357 | Ribulose-phosphate 3-epimerase | |||
| 1781 | 235 aa hypothetical protein | |||
| 1782 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405jDcmP |
| 1783 | V | V.Kpni405hDcmP (100% identity) | V.Kpni405jDcmP | |
| 1784 | inner membrane transporter YedA | |||
| 3759 | 192 aa hypothetical protein | |||
| 3760 | M | M.Kpni405hORF3839P (100% identity) | M.Kpni405jORF3760P | |
| 3761 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 356 | Cell division protein DamX | |||
| 357 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405fDamP |
| 358 | Ribulose-phosphate 3-epimerase | |||
| 1702 | 235 aa hypothetical protein | |||
| 1703 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405fDcmP |
| 1704 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405fDcmP | |
| 1705 | inner membrane transporter YedA | |||
| 2906 | 845 aa hypothetical protein | |||
| 2907 | M | M.Kpn63991ORF15670P (99% identity) | M.Kpni405fORF2907P | |
| 2908 | 75 aa hypothetical protein | |||
| 4264 | 291 aa hypothetical protein | |||
| 4265 | M | M.EclBTORFBP (96% identity) | M.Kpni405fORF4265P | |
| 4266 | R | EclBTORFBP (98% identity) | R1.Kpni405fORF4265P | |
| 4267 | R | R2.SenWT5ORF20880P (73% identity) | R2.Kpni405fORF4265P | |
| 4268 | 33 aa hypothetical protein | |||
| chromosome main | ||||
| 357 | Cell division protein DamX | |||
| 358 | M | M.KspC31DamP (100% identity) | GATC | M.Kpni405hDamP |
| 359 | Ribulose-phosphate 3-epimerase | |||
| 1832 | 235 aa hypothetical protein | |||
| 1833 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpni405hDcmP |
| 1834 | V | V.Kpni405jDcmP (100% identity) | V.Kpni405hDcmP | |
| 1835 | inner membrane transporter YedA | |||
| 3838 | 192 aa hypothetical protein | |||
| 3839 | M | M.Kpni405jORF3760P (100% identity) | M.Kpni405hORF3839P | |
| 3840 | 101 aa hypothetical protein | |||
| chromosome main | ||||
| 355 | Cell division protein DamX | |||
| 356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn405lDamP |
| 357 | Ribulose-phosphate 3-epimerase | |||
| 1782 | 235 aa hypothetical protein | |||
| 1783 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn405lDcmP |
| 1784 | V | V.Kpni405jDcmP (100% identity) | V.Kpn405lDcmP | |
| 1785 | inner membrane transporter YedA | |||
| 3788 | 192 aa hypothetical protein | |||
| 3789 | M | M.Kpni405jORF3760P (100% identity) | M.Kpn405lORF3789P | |
| 3790 | 101 aa hypothetical protein | |||
| 4434 | Beta-xylosidase | |||
| 4435 | R | Kpni405jORF4407P (100% identity) | Kpn405lORF4435P | |
| 4436 | 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin | |||
| chromosome main | ||||
| 355 | Cell division protein DamX | |||
| 356 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn405mDamP |
| 357 | Ribulose-phosphate 3-epimerase | |||
| 1785 | 235 aa hypothetical protein | |||
| 1786 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn405mDcmP |
| 1787 | V | V.Kpni405jDcmP (100% identity) | V.Kpn405mDcmP | |
| 1788 | inner membrane transporter YedA | |||
| 4465 | Beta-xylosidase | |||
| 4466 | R | Kpni405jORF4407P (100% identity) | Kpn405mORF4466P | |
| 4467 | 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin | |||
| plasmid P1 | ||||
| 99 | 293 aa hypothetical protein CJD35_20465 | |||
| 5182 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn405mORF5183P |
| 5183 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn405mORF5183P |
| 94 | IS1 family transposase | |||
| plasmid P1 | ||||
| 99 | 293 aa hypothetical protein CJD35_20465 | |||
| 5135 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405cORF5136P |
| 5136 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405cORF5136P |
| 93 | IS1 family transposase | |||
| plasmid P1 | ||||
| 88 | IS1 family transposase | |||
| 5173 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn405kORF5173P |
| 5174 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn405kORF5173P |
| 91 | 293 aa hypothetical protein CJD35_20465 | |||
| plasmid P1 | ||||
| 74 | IS1 family transposase | |||
| 5065 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405jORF5065P |
| 5066 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405jORF5065P |
| 77 | 293 aa hypothetical protein CJD35_20465 | |||
| plasmid P1 | ||||
| 104 | 293 aa hypothetical protein CJD35_20465 | |||
| 5202 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405hORF5203P |
| 5203 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405hORF5203P |
| 98 | IS1 family transposase | |||
| plasmid P1 | ||||
| 63 | IS1 family transposase | |||
| 5112 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405aORF5112P |
| 5113 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405aORF5112P |
| 66 | 293 aa hypothetical protein CJD35_20465 | |||
| plasmid P1 | ||||
| 90 | IS1 family transposase | |||
| 5185 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405dORF5185P |
| 5186 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405dORF5185P |
| 96 | 293 aa hypothetical protein CJD35_20465 | |||
| plasmid P1 | ||||
| 68 | 293 aa hypothetical protein CJD35_20465 | |||
| 5179 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405gORF5180P |
| 5180 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405gORF5180P |
| 62 | IS1 family transposase | |||
| plasmid P1 | ||||
| 64 | IS1 family transposase | |||
| 5258 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405eORF5258P |
| 5259 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405eORF5258P |
| 70 | 293 aa hypothetical protein CJD35_20465 | |||
| plasmid P1 | ||||
| 63 | IS1 family transposase | |||
| 5116 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpni405ORF5116P |
| 5117 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpni405ORF5116P |
| 66 | 293 aa hypothetical protein CJD35_20465 | |||
| plasmid P1 | ||||
| 94 | 293 aa hypothetical protein CJD35_20465 | |||
| 5150 | R | YpsR1ORFAP (99% identity) | CCWGG | R2.Kpn405lORF5151P |
| 5151 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn405lORF5151P |
| 88 | IS1 family transposase | |||
| plasmid P2 | ||||
| 5307 | 75 aa hypothetical protein | |||
| ??? | M | M.Kpni405ORFAP (100% identity) | M.Kpni405aORFAP | |
| 5309 | 277 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5253 | 76 aa hypothetical protein | |||
| 5254 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpn405lORF5254P | |
| 5255 | 73 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5392 | 75 aa hypothetical protein | |||
| 5393 | M | M.Rpl13095ORF6118P (100% identity) | GATC | M.Kpni405hORF5393P |
| 5394 | 277 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5383 | DNA replication protein DnaC | |||
| 5384 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.Kpni405cORF5384P |
| 5385 | R | Sen20597ORF9325P (100% identity) | CCWGG | Kpni405cORF5384P |
| 5386 | 82 aa hypothetical protein | |||
| 5398 | 250 aa hypothetical protein | |||
| 5399 | M | M.Kpn0112ORF28385P (98% identity) | M.Kpni405cORF5399P | |
| 5400 | 1126 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5096 | 76 aa hypothetical protein | |||
| 5097 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpni405fORF5097P | |
| 5098 | 73 aa hypothetical protein | |||
| plasmid P2 | ||||
| 5311 | 75 aa hypothetical protein | |||
| ??? | M | M.Kpni405aORFAP (100% identity) | M.Kpni405ORFAP | |
| 5313 | 277 aa hypothetical protein | |||