Escherichia coli 19SZHZ886Rt |
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Putative Escherichia coli 19SZHZ886Rt RM systems
Ref: Liu,B. et al. unpublished
REBASE ref # 34563
| Sequence length: | GenBank #: | |
| Chromosome: | 4,575,936 bp | CP080080 |
| plasmid p886Rt_247k_tetX: | 246,552 bp | CP080081 |
| plasmid p886Rt_hybrid: | 110,148 bp | CP080082 |
| plasmid p886Rt_IncY: | 93,332 bp | CP080083 |
REBASE acronym: Eco886Rt
Org_num: 58516
All begin KZO17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3280 | transposase domain-containing protein | |||
| 3285 | R | EcoB379ORF5755P (99% identity) | Eco886RtORF3295P | |
| 3290 | S | S.Eco502CCORF11100P (100% identity) | S.Eco886RtORF3295P | |
| 3295 | M | M.EcoB379ORF5755P (100% identity) | M.Eco886RtORF3295P | |
| 3300 | GTPase family protein | |||
| 8870 | IS5 family transposase | |||
| 8875 | M | M.Kpn99ORF25615P (100% identity) | M.Eco886RtORF8875P | |
| 8880 | S | S.EcoJS426ORF1170P (100% identity) | S.Eco886RtORF8875P | |
| 8885 | YecA family protein | |||
| 8890 | R | EcoZ063ORF9555P (100% identity) | Eco886RtORF8875P | |
| 8895 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1635 | cell division protein DamX | |||
| 1640 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco886RtDamP |
| 1645 | ribulose-phosphate 3-epimerase | |||
| 3830 | DEAD/DEAH box helicase | |||
| 3835 | RM | Eco2CCORF31360P (96% identity) | Eco886RtORF3835P | |
| 8600 | phosphohydrolase | |||
| 8605 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco886RtDcmP |
| 8610 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Eco886RtDcmP |
| 8615 | drug/metabolite exporter YedA | |||
| 17145 | phage holin, lambda family | |||
| 17150 | M | M.EcoHZ13ORF18155P (100% identity) | M.Eco886RtORF17150P | |
| 17155 | 67 aa hypothetical protein | |||
| 17190 | LexA family transcriptional regulator | |||
| 17195 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco886RtORF17195P |
| 17200 | PerC family transcriptional regulator | |||
| 19150 | HNH endonuclease | |||
| 19155 | R | SflSTLE4ORF19250P (61% identity) | Eco886RtORF19155P | |
| 19160 | IS1 family transposase | |||
| plasmid p886Rt_247k_tetX | ||||
| 22785 | 55 aa hypothetical protein | |||
| 22790 | M | M.Sens770ORF21675P (100% identity) | M.Eco886RtORF22790P | |
| 22795 | thermonuclease family protein | |||
| 23240 | DNA-binding protein | |||
| 23245 | M | M.Ype21801ORF197P (100% identity) | M.Eco886RtORF23245P | |
| 23250 | 273 aa hypothetical protein | |||
| plasmid p886Rt_hybrid | ||||
| 23860 | 73 aa hypothetical protein | |||
| 23865 | M | M.SdyFF51ORF24515P (100% identity) | M.Eco886RtORF23865P | |
| 23870 | 101 aa hypothetical protein | |||
| plasmid p886Rt_IncY | ||||
| 24495 | TerB family tellurite resistance protein | |||
| 24515 | M | M.Eco46C07ORF25385P (99% identity) | M.Eco886RtORF24515P | |
| 24520 | recombination-associated protein RdgC | |||