Akkermansia muciniphila NB2A-8-WC |
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Putative Akkermansia muciniphila NB2A-8-WC RM systems
Ref: Spreafico,A. et al. Nat Cancer (2022) In press
REBASE ref # 34529
Complete sequence: 2,831,438 bp
GenBank #: CP097283
REBASE acronym: Amu8WC
Org_num: 58337
All begin M5E88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7650 | 127 aa hypothetical protein | |||
| ??? | R | Amu500bORF4370P (98% identity) | Amu8WCORF7685P | |
| 7670 | AAA family ATPase | |||
| 7675 | S | S.AmuAMDK2ORF4720P (39% identity) | S2.Amu8WCORF7685P | |
| 7680 | S | S.AmuAMDK2ORF4720P (55% identity) | S1.Amu8WCORF7685P | |
| 7685 | M | M.AmuAMDK2ORF4720P (90% identity) | M.Amu8WCORF7685P | |
| 7690 | 93 aa hypothetical protein | |||
| 17925 | threonine/serine exporter family protein | |||
| 17930 | M | M.Amu96ORF10345P (93% identity) | M.Amu8WCORF17930P | |
| 17935 | S | S1.Amu114322ORF1485P (58% identity) | S1.Amu8WCORF17930P | |
| 17940 | restriction endonuclease subunit S | |||
| 17945 | Fic family protein | |||
| 17950 | tyrosine-type recombinase/integrase | |||
| 17955 | phage integrase N-terminal SAM-like | |||
| 17960 | 79 aa hypothetical protein | |||
| 17965 | S | S1.Amu8WCORF17930P (66% identity) | S2.Amu8WCORF17930P | |
| ??? | R | Amu96ORF10345P (99% identity) | Amu8WCORF17930P | |
| 17995 | 52 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 630 | 81 aa hypothetical protein | |||
| 635 | M | M.Amuk1990ORF355P (94% identity) | M.Amu8WCORF635P | |
| 640 | 79 aa hypothetical protein | |||
| 5895 | 63 aa hypothetical protein | |||
| 5900 | M | M.CspSK3ORFAP (17% identity) | M.Amu8WCORF5900AP | |
| 5905 | M | M.Amu1756ORF5930P (27% identity) | M.Amu8WCORF5900BP | |
| 5910 | 364 aa hypothetical protein | |||
| 12740 | 67 aa hypothetical protein | |||
| 12745 | M | M.AspMGS1ORFKP (19% identity) | M.Amu8WCORF12745AP | |
| 12750 | M | M.AspMGS1ORFKP (67% identity) | M.Amu8WCORF12745BP | |
| 12755 | 81 aa hypothetical protein | |||
| 13075 | 254 aa hypothetical protein | |||
| 13080 | M | M.Aph2021aORFAP (92% identity) | M.Amu8WCORF13080P | |
| 13085 | 126 aa hypothetical protein | |||
| 14450 | helix-turn-helix domain-containing protein | |||
| 14455 | S | S.PmeBin400ORFAP (31% identity) | S1.Amu8WCORF14470P | |
| 14460 | S | S.PmeBin91ORFBP (26% identity) | S2.Amu8WCORF14470P | |
| 14465 | S | S.Amuk1990ORF8730P (10% identity) | S3.Amu8WCORF14470P | |
| ??? | M | M.Amuk1990ORF8730P (97% identity) | M.Amu8WCORF14470P | |
| 14485 | helix-turn-helix domain-containing protein | |||
| 17470 | 196 aa hypothetical protein | |||
| 17475 | M | M.Amu2454ORFBP (91% identity) | M.Amu8WCORF17475P | |
| 17480 | tyrosine recombinase | |||
| 18580 | tyrosine-type recombinase/integrase | |||
| 18585 | M | M1.Amuk1990ORF11190P (72% identity) | M1.Amu8WCORF18585P | |
| 18590 | M | M2.Amu1616ORF11250P (40% identity) | M2.Amu8WCORF18585P | |
| 18595 | DEAD/DEAH box helicase family protein | |||
| 18920 | 96 aa hypothetical protein | |||
| 18925 | M | M.Amu1863ORF6325P (100% identity) | M.Amu8WCORF18925P | |
| 18930 | excisionase family DNA-binding protein | |||
| 19855 | 121 aa hypothetical protein | |||
| 19860 | M | M.AspMGS1ORFKP (100% identity) | M.Amu8WCORF19860P | |
| 19865 | 62 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16400 | 392 aa hypothetical protein | |||
| 16405 | R | AspMGS1McrBP (34% identity) | Amu8WCMcrBAP | |
| 16410 | 155 aa hypothetical protein | |||
| 16415 | 110 aa hypothetical protein | |||
| 16420 | R | Amu2454McrBP (29% identity) | Amu8WCMcrBBP | |
| 16425 | R | AmuAMDK1McrCP (88% identity) | Amu8WCMcrCP | |
| 16430 | SWF/SNF helicase family protein | |||