Phascolarctobacterium succinatutens NB2A-12-FMU |
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Putative Phascolarctobacterium succinatutens NB2A-12-FMU RM systems
Ref: Spreafico,A. et al. Nat Cancer (2022) In press
REBASE ref # 34529
Complete sequence: 2,345,971 bp
GenBank #: CP097284
REBASE acronym: PsuFMU
Org_num: 58813
All begin M5E81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2300 | 50 aa hypothetical protein | |||
| 2305 | M | M.PmeBin193ORFDP (89% identity) | M.PsuFMUORF2305P | |
| 2310 | S | S.GvaB482ORF10P (36% identity) | S1.PsuFMUORF2305P | |
| 2315 | tyrosine-type recombinase/integrase | |||
| 2320 | S | S.Tpa21527ORF2670P (19% identity) | S2.PsuFMUORF2305P | |
| 2325 | S | S1.PmeBin387ORFCP (38% identity) | S3.PsuFMUORF2305P | |
| 2330 | R | Rsp499ORF2525P (78% identity) | PsuFMUORF2305P | |
| 2335 | PDDEXK nuclease domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 585 | biotin synthase BioB | |||
| 590 | R | R1.Bmy511ORF4800P (52% identity) | PsuFMUORF595P | |
| 595 | M | M.CspM240ORF841P (66% identity) | M.PsuFMUORF595P | |
| 600 | V | V.Psp4147ORF4275P (57% identity) | V.PsuFMUORF595P | |
| 605 | response regulator | |||
| 5275 | transposase | |||
| 5280 | RM | BxyORF5880P (45% identity) | PsuFMUORF5280P | |
| 5285 | 63 aa hypothetical protein | |||
| 9865 | PD-(D/E)XK nuclease family transposase | |||
| 9870 | RM | AmuAKKORF11940P (56% identity) | PsuFMUORF9875P | |
| 9875 | M | M.Espc25ORF9400P (32% identity) | M.PsuFMUORF9875P | |
| 9880 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6100 | 4-hydroxy-tetrahydrodipicolinate reductase | |||
| 6105 | R | Psp4147ORF10470P (97% identity) | PsuFMUORF6105P | |
| 6110 | 183 aa hypothetical protein | |||
| 6170 | AAA family ATPase | |||
| 6175 | M | M.Psp4147ORF10470P (33% identity) | M.PsuFMUORF6175P | |
| 6180 | DUF4391 domain-containing protein | |||
| 10965 | AAA family ATPase | |||
| 10970 | R | Bce120ORF1818P (17% identity) | PsuFMUORF10990BP | |
| 10975 | transposase | |||
| 10980 | transposase | |||
| 10985 | R | OspBA2ORF2995P (35% identity) | PsuFMUORF10990AP | |
| 10990 | M | M.Fsp3333ORF8525P (76% identity) | M.PsuFMUORF10990P | |
| 10995 | Fic family protein | |||