Salmonella enterica 179 |
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Putative Salmonella enterica 179 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,988,055 bp | CP091560 |
| plasmid p179-mcr: | 215,225 bp | CP091561 |
REBASE acronym: Sens179
Org_num: 58835
All begin INN78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20285 | restriction endonuclease | |||
| 20290 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sens179ORF20295P |
| 20295 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sens179ORF20295P |
| 20300 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sens179ORF20295P |
| 20305 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sens179DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sens179ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 3225 | DUF2732 domain-containing protein | |||
| 3230 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sens179ORF3230P |
| 3235 | replication endonuclease | |||
| 5590 | IS6-like element IS26 family transposase | |||
| 5595 | M | M.StyCORF187P (49% identity) | M.Sens179ORF5595P | |
| 5600 | thermonuclease family protein | |||
| 6230 | ead/Ea22-like family protein | |||
| 6235 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sens179ORF6235P |
| 6240 | DUF551 domain-containing protein | |||
| 9565 | PerC family transcriptional regulator | |||
| 9570 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sens179ORF9570P |
| 9575 | RusA family crossover junction | |||
| 9820 | phosphohydrolase | |||
| 9825 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sens179DcmP |
| 9830 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sens179DcmP |
| 9835 | drug/metabolite exporter YedA | |||
| 20445 | BREX system P-loop protein BrxC | |||
| 20450 | RM | StyUK1IV (100% identity) | GATCAG | Sens179ORF20450P |
| 20455 | AAA family ATPase | |||
| plasmid p179-mcr | ||||
| 25005 | 55 aa hypothetical protein | |||
| 25010 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sens179ORF25010P |
| 25015 | thermonuclease family protein | |||
| 25495 | 48 aa hypothetical protein | |||
| 25500 | M | M.YpsF1ORFBP (100% identity) | M.Sens179ORF25500P | |
| 25505 | 202 aa hypothetical protein | |||
| 25615 | DNA-binding protein | |||
| 25620 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sens179ORF25620P |
| 25625 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17975 | small effector SsaA | |||
| 17980 | R | StyUK1IP (99% identity) | CAGAG | Sens179ORF17985P |
| 17985 | M | M.StyUK1I (100% identity) | CAGAG | M.Sens179ORF17985P |
| 17990 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20280 | BrnT family toxin | |||
| 20285 | R | StyUK1MrrP (100% identity) | Sens179MrrP | |
| 20290 | type I restriction-modification system | |||