Salmonella enterica 628 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica 628 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,854,608 bp | CP091550 |
| plasmid p628-mcr: | 301,285 bp | CP091551 |
REBASE acronym: Sen628
Org_num: 58838
All begin INN82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20390 | 322 aa hypothetical protein | |||
| 20395 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen628ORF20400P |
| 20400 | M | M.Spy5740I (99% identity) | AGANNNNNNNNCTGG | M.Sen628ORF20400P |
| 20405 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen628ORF20400P |
| 20410 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1905 | cell division protein DamX | |||
| 1910 | M | M.StyTDamP (100% identity) | GATC | M.Sen628DamP |
| 1915 | ribulose-phosphate 3-epimerase | |||
| 2395 | DUF2556 family protein | |||
| 2400 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen628ORF2400P |
| 2405 | DNA-binding transcriptional regulator Fis | |||
| 3320 | DUF3850 domain-containing protein | |||
| 3325 | M | M.SspZ54ORF6040P (100% identity) | GATC | M.Sen628ORF3325P |
| 3330 | replication endonuclease | |||
| 3520 | TraR/DksA family transcriptional regulator | |||
| 3525 | M | M.Sen22640ORF3160P (97% identity) | M.Sen628ORF3525P | |
| 3530 | replication endonuclease | |||
| 6145 | phage holin, lambda family | |||
| 6150 | M | M.SflLIN17ORF17405P (99% identity) | M.Sen628ORF6150P | |
| 6155 | 67 aa hypothetical protein | |||
| 9925 | phosphohydrolase | |||
| 9930 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen628DcmP |
| 9935 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen628DcmP |
| 9940 | drug/metabolite exporter YedA | |||
| plasmid p628-mcr | ||||
| 24705 | 55 aa hypothetical protein | |||
| 24710 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Sen628Dcm2P |
| 24715 | thermonuclease family protein | |||
| 25410 | DNA-binding protein | |||
| 25415 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sen628ORF25415P |
| 25420 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18065 | small effector SsaA | |||
| 18070 | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen628ORF18075P |
| 18075 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen628ORF18075P |
| 18080 | MFS transporter | |||