Vagococcus lutrae AT03 |
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Putative Vagococcus lutrae AT03 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 2,080,409 bp | CP097072 |
| plasmid pAT03-a: | 10,004 bp | CP097073 |
REBASE acronym: VluAT03
Org_num: 58227
All begin M2901_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1380 | Y-family DNA polymerase | |||
| 1385 | S | S.Lme213M0ORFDP (74% identity) | S.VluAT03ORF1385P | |
| 1390 | DUF1292 domain-containing protein | |||
| 4040 | transposase | |||
| 4045 | S | S.Spa417ORF11205P (39% identity) | S.VluAT03ORF4050P | |
| 4050 | M | M.Sha80PORF13185P (69% identity) | M.VluAT03ORF4050P | |
| 4055 | R | LreTD1ORF815P (59% identity) | VluAT03ORF4050P | |
| 4060 | 476 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAT03-a | ||||
| 10035 | Tet(L)/Tet(K)/Tet(45) family tetracycline efflux | |||
| 10040 | R | Lho254ORF2148P (66% identity) | VluAT03ORF10045P | |
| 10045 | M | M.Sho762ORF7925P (72% identity) | M.VluAT03ORF10045P | |
| 10050 | replication initiation protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2910 | dihydroxyacetone kinase transcriptional | |||
| 2915 | R | VluAT46bORF8430P (100% identity) | VluAT03ORF2915P | |
| 2920 | (deoxy)nucleoside triphosphate | |||