Rhodococcus qingshengii JCM 15477 djl-6 |
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Putative Rhodococcus qingshengii JCM 15477 djl-6 RM systems
Ref: Zhang,M. unpublished
REBASE ref # 31461
| Sequence length: | GenBank #: | |
| Chromosome: | 6,405,102 bp | CP096563 |
| plasmid pdjl-6-1: | 108,815 bp | CP096564 |
| plasmid pdjl-6-3: | 96,126 bp | CP096566 |
| plasmid pdjl-6-4: | 516,925 bp | CP096567 |
REBASE acronym: Rqi15477
Org_num: 57996
All begin M0639_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 210 | DEAD/DEAH box helicase | |||
| 215 | RM | RqiIGTS8ORFEP (99% identity) | Rqi15477ORF215P | |
| 220 | 678 aa hypothetical protein | |||
| 1630 | DUF998 domain-containing protein | |||
| 1635 | V | V.RspP2ORF14690P (100% identity) | CTCGAG | V.Rqi15477ORF1645P |
| 1640 | 286 aa hypothetical protein | |||
| 1645 | M | M.RspRHZ01ORFAP (100% identity) | CTCGAG | M.Rqi15477ORF1645P |
| 1650 | glycolipid-binding domain-containing | |||
| 19105 | TetR/AcrR family transcriptional regulator | |||
| 19110 | M | M.RqiIGTS8ORFAP (96% identity) | M.Rqi15477ORF19110P | |
| 19120 | multidrug effflux MFS transporter | |||
| plasmid pdjl-6-1 | ||||
| 29930 | BREX system P-loop protein BrxC | |||
| 29935 | RM | Rqi15477ORF30875P (100% identity) | Rqi15477ORF29935P | |
| 29940 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pdjl-6-3 | ||||
| 30870 | BREX system P-loop protein BrxC | |||
| 30875 | RM | Rqi15477ORF29935P (100% identity) | Rqi15477ORF30875P | |
| 30880 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pdjl-6-4 | ||||
| 31265 | transposase | |||
| 31270 | R | RspDN22ORF34235P (88% identity) | Rqi15477ORF31275P | |
| 31275 | M | M.RspGA1ORFDP (83% identity) | M.Rqi15477ORF31275P | |
| 31280 | 94 aa hypothetical protein | |||