Deinococcus geothermalis DSM 11300 |
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Putative Deinococcus geothermalis DSM 11300 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9660
| Sequence length: | GenBank #: | |
| Chromosome: | 2,467,205 bp | CP000359 (NC_008025) |
| plasmid pDGEO02: | 205,686 bp | CP000856 (NC_009939) |
REBASE acronym: DgeD
Org_num: 4427
All begin Dgeo_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2011 | GCN5-related N-acetyltransferase | |||
| 2012 | R | LhoZ1IIP (85% identity) | DgeDORF2017P | |
| 2013 | DOC domain and unchracterized virulence related | |||
| 2014 | type I restriction-modification system | |||
| 2015 | DUF262 domain-containing protein | |||
| 2016 | S | S.Tta154175ORFCP (48% identity) | S.DgeDORF2017P | |
| 2017 | M | M.ZbaParf2ORF2030P (91% identity) | M.DgeDORF2017P | |
| 2018 | 141 aa hypothetical protein | |||
| 2013 | DOC domain and unchracterized virulence related | |||
| 2014 | R | type I restriction-modification system | DgeDORF2014P | |
| 2015 | DUF262 domain-containing protein | |||
| plasmid pDGEO02 | ||||
| 3107 | 74 aa hypothetical protein | |||
| 3108 | M | M.CgiWM02ORF790P (93% identity) | M.DgeDORF3108P | |
| 3109 | S | S.Pae383ORF8870P (65% identity) | S.DgeDORF3108P | |
| 3110 | R | Cde65ORF5986P (95% identity) | DgeDORF3108P | |
| 3111 | Predicted metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 922 | NADH dehydrogenase subunit N | |||
| 923 | RM | CphBORF745P (78% identity) | DgeDORF923P | |
| 924 | Adenine-specific DNA methylase | |||
| 923 | type III restriction system endonuclease, | |||
| 924 | RM | Adenine-specific DNA methylase | DgeDORF924AP | |
| 925 | transposase, IS4 | |||
| 926 | RM | M1.FamOYT1ORF2667P (46% identity) | DgeDORF924BP | |
| 927 | RM | M2.DspRLORF11080P (93% identity) | DgeDORF924CP | |
| 928 | transposase, IS605 OrfB | |||
| 1544 | helicase-like protein | |||
| 1545 | RM | Dra27603ORF12605P (55% identity) | DgeDORF1545P | |
| 1546 | formyltetrahydrofolate-dependent | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1503 | 555 aa hypothetical protein | |||
| 1504 | R | GTPase subunit of restriction endonuclease | DgeDMcrBP | |
| 1505 | Protein of unknown function DUF11 | |||