Vibrio parahaemolyticus XMM117 |
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Putative Vibrio parahaemolyticus XMM117 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
| Sequence length: | GenBank #: | |
| chromosome I: | 3,518,178 bp | CP064037 |
| chromosome II: | 1,998,942 bp | CP064038 |
| plasmid pXMM117-2: | 87,025 bp | CP064040 |
REBASE acronym: Vpa117
Org_num: 57904
All begin H9J99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 130 | DUF4276 family protein | |||
| 135 | R | Vpa116ORF610P (100% identity) | Vpa117ORF145P | |
| 140 | ATP-binding protein | |||
| 145 | M | M.Vpa116ORF610P (100% identity) | M.Vpa117ORF145P | |
| 150 | S | S.Vpa116ORF610P (100% identity) | S.Vpa117ORF145P | |
| 155 | SIR2 family protein | |||
| 2915 | AAA family ATPase | |||
| 2920 | S | S.Vpa116ORF14225P (100% identity) | S.Vpa117ORF2925P | |
| 2925 | M | M.VspdhgORF1780P (100% identity) | M.Vpa117ORF2925P | |
| 2930 | multidrug transporter | |||
| 2935 | 428 aa hypothetical protein | |||
| 2940 | R | Vpa116ORF14225P (100% identity) | Vpa117ORF2925P | |
| 2945 | MarR family transcriptional regulator | |||
| 4175 | 331 aa hypothetical protein | |||
| 4180 | S | S.Vpa116ORF12965P (100% identity) | S.Vpa117ORF4185P | |
| 4185 | M | M.Vpa116ORF12965P (100% identity) | M.Vpa117ORF4185P | |
| 4190 | 132 aa hypothetical protein | |||
| 4195 | 49 aa hypothetical protein | |||
| 4200 | elongation factor Ts | |||
| 4205 | site-specific DNA-methyltransferase | |||
| 4210 | R | Vpa116ORF12965P (100% identity) | Vpa117ORF4185P | |
| 4215 | 806 aa hypothetical protein | |||
| 5495 | recombinase family protein | |||
| 5500 | M | M.Vpa116ORF11650P (100% identity) | M.Vpa117ORF5500P | |
| 5505 | S | S.Vpa116ORF11650P (99% identity) | S.Vpa117ORF5500P | |
| 5510 | R | Vpa116ORF11650P (100% identity) | Vpa117ORF5500P | |
| 5515 | 198 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 4200 | elongation factor Ts | |||
| 4205 | M | M.Vpa116ORF12945P (100% identity) | M.Vpa117ORF4205P | |
| 4210 | DEAD/DEAH box helicase family protein | |||
| 15425 | ribulose-phosphate 3-epimerase | |||
| 15430 | M | M.Vpa116DamP (100% identity) | GATC | M.Vpa117DamP |
| 15435 | AAA family ATPase | |||
| plasmid pXMM117-2 | ||||
| 26080 | 241 aa hypothetical protein | |||
| ??? | M | M.Vha7ORF28395P (98% identity) | M.Vpa117ORF26085P | |
| 26095 | 50 aa hypothetical protein | |||
| 26225 | 100 aa hypothetical protein | |||
| 26230 | M | M.VcaC013ORF27080P (92% identity) | M.Vpa117ORF26230P | |
| 26235 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 14740 | PAAR domain-containing protein | |||
| 14745 | R | Vpa116ORF2405P (100% identity) | Vpa117ORF14750P | |
| 14750 | M | M.Vpa116ORF2405P (100% identity) | M.Vpa117ORF14750P | |
| 14755 | 201 aa hypothetical protein | |||
| chromosome II | ||||
| 19155 | 571 aa hypothetical protein | |||
| 19160 | M | M.Vpa116ORF24510P (100% identity) | M.Vpa117ORF19160P | |
| 19165 | R | Vpa116ORF24510P (100% identity) | Vpa117ORF19160P | |
| 19170 | 161 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2950 | AlpA family phage regulatory protein | |||
| 2955 | R | VspdhgMrrP (100% identity) | Vpa117MrrP | |
| 2960 | 132 aa hypothetical protein | |||