Salmonella enterica subsp. enterica serovar Indiana 22 |
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Putative Salmonella enterica subsp. enterica serovar Indiana 22 RM systems
Ref: Chao,G. and Wang,T. unpublished
REBASE ref # 34392
| Sequence length: | GenBank #: | |
| Chromosome: | 4,894,296 bp | CP096118 |
| plasmid p22-1: | 235,522 bp | CP096119 |
REBASE acronym: SenI22
Org_num: 57850
All begin MZK41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3370 | IS5-like element ISKpn26 family transposase | |||
| 3375 | R | SenLY67ORF3575P (100% identity) | SenI22ORF3385P | |
| 3380 | S | S.SenLY67ORF3575P (100% identity) | S.SenI22ORF3385P | |
| 3385 | M | M.SenLY67ORF3575P (100% identity) | M.SenI22ORF3385P | |
| 3390 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.SenI22DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenI22ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3150 | DUF3850 domain-containing protein | |||
| 3155 | M | M.SspZ54ORF6040P (100% identity) | GATC | M.SenI22ORF3155P |
| 3160 | replication endonuclease | |||
| 3490 | TraR/DksA family transcriptional regulator | |||
| 3495 | M | M.SspZ54ORF6265P (100% identity) | GATC | M.SenI22ORF3495P |
| 3500 | replication endonuclease | |||
| 10140 | phosphohydrolase | |||
| 10145 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenI22DcmP |
| 10150 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.SenI22DcmP |
| 10155 | drug/metabolite exporter YedA | |||
| 20680 | YebC/PmpR family DNA-binding transcriptional | |||
| 20685 | R | Sensp14178ORF19855P (100% identity) | SenI22ORF20685P | |
| 20690 | DUF2220 domain-containing protein | |||
| 20725 | TnsA endonuclease N-terminal domain-containing | |||
| 20730 | R | SenV2ORF20065P (100% identity) | SenI22ORF20730P | |
| 20735 | malate transporter | |||
| plasmid p22-1 | ||||
| 23860 | 55 aa hypothetical protein | |||
| 23865 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenI22ORF23865P |
| 23870 | thermonuclease family protein | |||
| 24330 | 48 aa hypothetical protein | |||
| 24335 | M | M.YpsF1ORFBP (100% identity) | M.SenI22ORF24335P | |
| 24340 | 202 aa hypothetical protein | |||
| 24450 | DNA-binding protein | |||
| 24455 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenI22ORF24455P |
| 24460 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18070 | small effector SsaA | |||
| 18075 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenI22ORF18085P |
| 18080 | IS1-like element IS1B family transposase | |||
| 18085 | M | M.Sensp14152ORF17835P (100% identity) | CAGAG | M.SenI22ORF18085P |
| 18090 | MFS transporter | |||