Actinobacillus pleuropneumoniae APP5 |
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Putative Actinobacillus pleuropneumoniae APP5 RM systems
Ref: Li,Y. unpublished
REBASE ref # 24350
Complete sequence: 2,379,826 bp
GenBank #: CP063424
REBASE acronym: AplAPP5
Org_num: 57799
All begin IOD66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 605 | AAA family ATPase | |||
| 610 | R | VchSXTORFAP (99% identity) | AplAPP5ORF625P | |
| 615 | BstXI family restriction endonuclease | |||
| 620 | S | S.VchSXTORFAP (100% identity) | S.AplAPP5ORF625P | |
| 625 | M | M.VchSXTORFAP (100% identity) | M.AplAPP5ORF625P | |
| 630 | WYL domain-containing protein | |||
| 1960 | NAD(P)-dependent oxidoreductase | |||
| 1965 | R | AplL20ORF1194P (100% identity) | AplAPP5ORF1975P | |
| 1970 | DNA binding domain-containing protein | |||
| 1975 | M | M.AplL20ORF1194P (100% identity) | M.AplAPP5ORF1975P | |
| 1980 | S | S.AplL20ORF1194P (100% identity) | S.AplAPP5ORF1975P | |
| 1985 | LLM class flavin-dependent oxidoreductase | |||
| 4850 | ribosome maturation factor RimP | |||
| 4860 | R | AplL20ORF633P (100% identity) | AplAPP5ORF4875P | |
| 4865 | abortive infection family protein | |||
| 4870 | S | S.AplL20ORF633P (100% identity) | S.AplAPP5ORF4875P | |
| 4875 | M | M.AplL20ORF633P (99% identity) | M.AplAPP5ORF4875P | |
| 4880 | bifunctional tetrahydrofolate | |||
| 6380 | ABC transporter ATP-binding protein | |||
| 6385 | R | AplK17ORF6155P (100% identity) | GAAGNNNNNNNTCC | AplAPP5ORF6405P |
| 6390 | anticodon nuclease | |||
| 6395 | S | S.AplL20ORF287P (100% identity) | GAAGNNNNNNNTCC | S.AplAPP5ORF6405P |
| 6400 | Bro-N domain-containing protein | |||
| 6405 | M | M.AplL20ORF287P (100% identity) | GAAGNNNNNNNTCC | M.AplAPP5ORF6405P |
| 6410 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 610 | type I restriction endonuclease subunit R | |||
| 615 | R | Vch2387ORFEP (100% identity) | AplAPP5ORF615P | |
| 620 | restriction endonuclease subunit S | |||
| 1930 | DUF479 domain-containing protein | |||
| 1935 | M | M.AplL20ORF1202P (97% identity) | CCGG | M.AplAPP5ORF1935P |
| 1940 | R | AplK17ORF1300P (100% identity) | CCGG | AplAPP5ORF1935P |
| 1945 | V | V.AplL20ORF1202P (100% identity) | V.AplAPP5ORF1935P | |
| 1950 | MarC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3920 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic | |||
| 3925 | M | M.AplL20ORF812P (100% identity) | M.AplAPP5ORF3925P | |
| 3930 | R | AplL20ORF812P (100% identity) | AplAPP5ORF3925P | |
| 3935 | 30S ribosomal protein S12 methylthiotransferase | |||
| 4505 | MurR/RpiR family transcriptional regulator | |||
| 4510 | M | M.AplL20ORF704P (100% identity) | M.AplAPP5ORF4510P | |
| 4515 | R | AplK17ORF3885P (100% identity) | AplAPP5ORF4510P | |
| 4520 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 590 | 93 aa hypothetical protein | |||
| 595 | R | Vch216MrrP (100% identity) | AplAPP5MrrP | |
| 600 | 5-methylcytosine-specific restriction | |||
| 595 | restriction endonuclease | |||
| 600 | R | VchSXTMcrCP (100% identity) | AplAPP5McrCP | |
| 605 | R | VchSXTMcrBP (100% identity) | AplAPP5McrBP | |
| 610 | type I restriction endonuclease subunit R | |||