Neisseria dumasiana LMG 30012 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria dumasiana LMG 30012 RM systems
Ref: Nyongesa,S. et al. Res Sq (2022)
REBASE ref # 34181
Complete sequence: 2,679,563 bp
GenBank #: CP091509
REBASE acronym: Ndu30012
Org_num: 57513
All begin LVJ88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5655 | 387 aa hypothetical protein | |||
| 5660 | R | Nzo12229ORF185P (48% identity) | Ndu30012ORF5690BP | |
| 5665 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 5670 | cation transporter | |||
| 5675 | signal peptidase II | |||
| 5680 | ISL3-like element ISPpu12 family transposase | |||
| 5685 | R | Nzo12229ORF185P (19% identity) | Ndu30012ORF5690AP | |
| 5690 | M | M.Nzo12229ORF185P (99% identity) | M.Ndu30012ORF5690P | |
| 5695 | 244 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2240 | SMC-Scp complex subunit ScpB | |||
| 2245 | R | NmuEORF5911P (81% identity) | Ndu30012ORF2250P | |
| 2250 | M | M.NmuEORF5911P (85% identity) | M.Ndu30012ORF2250P | |
| 2255 | ribosome biogenesis GTPase YlqF | |||
| 5360 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase | |||
| 5365 | R | Nsp74A18ORF2755P (100% identity) | GATC | Ndu30012ORF5370P |
| 5370 | M | M2.Nwe13825ORFFP (97% identity) | M.Ndu30012ORF5370P | |
| 5375 | Dam family site-specific | |||
| 5370 | site-specific DNA-methyltransferase | |||
| 5375 | M | M2.Nwe15191ORFIP (100% identity) | GATC | M.Ndu30012ORF5375P |
| 5380 | 68 aa hypothetical protein | |||
| 7310 | 155 aa hypothetical protein | |||
| 7315 | M | M.Nan29644ORFBP (71% identity) | M.Ndu30012ORF7315P | |
| 7320 | 145 aa hypothetical protein | |||
| 7555 | Com family DNA-binding transcriptional | |||
| 7560 | M | M.Nan29644ORFEP (95% identity) | M1.Ndu30012ORF7560P | |
| 7565 | M | M.Nan29644ORFDP (97% identity) | M2.Ndu30012ORF7560P | |
| 7570 | 244 aa hypothetical protein | |||
| 8190 | carboxymuconolactone decarboxylase family | |||
| 8195 | M | M.Nsi2478ORFCP (87% identity) | M.Ndu30012ORF8195P | |
| 8200 | ATP-binding protein | |||
| 9190 | 100 aa hypothetical protein | |||
| 9195 | M | M.Nwe15191ORFDP (69% identity) | M.Ndu30012ORF9195P | |
| 9200 | 139 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3870 | zinc-dependent alcohol dehydrogenase family | |||
| 3875 | R | Nzo12230ORF1338P (95% identity) | Ndu30012ORF3880P | |
| ??? | M | M.Nwe28987ORFBP (97% identity) | M.Ndu30012ORF3880P | |
| 3885 | ABC transporter ATP-binding protein | |||