Salmonella enterica 1722 |
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Putative Salmonella enterica 1722 RM systems
Ref: Zhu,X. unpublished
REBASE ref # 30423
| Sequence length: | GenBank #: | |
| Chromosome: | 5,022,311 bp | CP068018 |
| plasmid unnamed1: | 208,610 bp | CP068019 |
REBASE acronym: Sen1722
Org_num: 57571
All begin JI996_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2815 | endoribonuclease SymE | |||
| 2820 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1722ORF2825P |
| 2825 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1722ORF2825P |
| 2830 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1722ORF2825P |
| 2835 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.Sen1722ORF15P |
| 20 | 329 aa hypothetical protein | |||
| 1185 | PerC family transcriptional regulator | |||
| 1190 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen1722ORF1190P |
| 1195 | LexA family transcriptional regulator | |||
| 4925 | PerC family transcriptional regulator | |||
| 4930 | M | M.Sens418ORF4945P (100% identity) | GATC | M.Sen1722ORF4930P |
| 4935 | LexA family transcriptional regulator | |||
| 4960 | 92 aa hypothetical protein | |||
| 4965 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen1722ORF4965P | |
| 4970 | phage holin, lambda family | |||
| 13525 | drug/metabolite exporter YedA | |||
| 13530 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen1722DcmP |
| 13535 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1722DcmP |
| 13540 | phosphohydrolase | |||
| 13780 | RusA family crossover junction | |||
| 13785 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen1722ORF13785P |
| 13790 | PerC family transcriptional regulator | |||
| 17100 | 92 aa hypothetical protein | |||
| 17105 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen1722ORF17105P |
| 17110 | ead/Ea22-like family protein | |||
| 17490 | IS6-like element IS26 family transposase | |||
| 17495 | M | M.StyCORF187P (37% identity) | M.Sen1722ORF17495P | |
| 17500 | thermonuclease family protein | |||
| 21180 | DNA-binding transcriptional regulator Fis | |||
| 21185 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1722ORF21185P |
| 21190 | DUF2556 family protein | |||
| 21675 | ribulose-phosphate 3-epimerase | |||
| 21680 | M | M.StyTDamP (100% identity) | GATC | M.Sen1722DamP |
| 21685 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 25180 | 55 aa hypothetical protein | |||
| 25185 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen1722ORF25185P |
| 25190 | thermonuclease family protein | |||
| 25590 | 48 aa hypothetical protein | |||
| 25595 | M | M.YpsF1ORFBP (100% identity) | M.Sen1722ORF25595P | |
| 25600 | 202 aa hypothetical protein | |||
| 25710 | DNA-binding protein | |||
| 25715 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen1722ORF25715P |
| 25720 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5405 | MFS transporter | |||
| 5410 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1722ORF5410P |
| 5415 | R | StyUK1IP (99% identity) | CAGAG | Sen1722ORF5410P |
| 5420 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2830 | type I restriction-modification system | |||
| 2835 | R | StyUK1MrrP (100% identity) | Sen1722MrrP | |
| 2840 | BrnT family toxin | |||